Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Multi-gene metabarcoding of fungi

PROVIDER: PRJNA1249409 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR33089200_1.fastq.gz	Fastqsanger.gz
	SRR33089200_2.fastq.gz	Fastqsanger.gz
	SRR33089201_1.fastq.gz	Fastqsanger.gz
	SRR33089201_2.fastq.gz	Fastqsanger.gz
	SRR33089202_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 72

Similar Datasets

Air/rain metagenome

Project description:Metabarcoding Rust Fungi

| PRJNA691580 | ENA

Fungi

Project description:DNA metabarcoding of fungi

| PRJDB15560 | ENA

Species-specific gene regulatory network rewiring mediated by the GATA-type regulator NsdD in Aspergillus [Ani_NsdD_ChIP_seq]

Project description:Multifunctional TFs are central in coordinating development and metabolism in filamentous fungi. In this study, we systematically dissect the regulatory functions of NsdD, a highly conserved GATA-type TF in Pezizomycotina, using network-based multi-omics approaches in two distantly related species, A. nidulans and A. flavus. Our analyses reveal that NsdD governs fungal development and metabolism through species-specific GRNs, directly targeting key upstream regulators and genes involved in core cellular processes. These regulatory distinctions underlie the morphological and metabolic differences observed between the two species. Notably, our cross-species comparison uncovers extensive GRN rewiring, demonstrating how evolutionary divergence can reshape transcriptional networks even under conserved regulatory control. The resulting GRN maps offer a valuable framework for understanding gene regulation in Aspergillus and provide a foundation for broader studies on the evolution of transcriptional networks and conserved regulatory factors in filamentous fungi.

2025-05-29 | GSE219139 | GEO

Species-specific gene regulatory network rewiring mediated by the GATA-type regulator NsdD in Aspergillus [Afl_NsdD_ChIP_seq]

2025-05-29 | GSE219137 | GEO

Project description:eDNA metabarcoding of airborne plants and fungi

| PRJNA576572 | ENA

Project description:Metabarcoding of wood- and bark-inhabiting fungi

| PRJNA1217464 | ENA

Soil fungi - ITS

Project description:Metabarcoding study of soil fungi following wildfire

| PRJNA876647 | ENA

Project description:Metabarcoding of soil fungi after wild fires

| PRJNA771250 | ENA