Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Metagenome profiling of saliva-derived microcosm biofilms

PROVIDER: PRJNA1269248 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR33742600_1.fastq.gz	Fastqsanger.gz
	SRR33742600_2.fastq.gz	Fastqsanger.gz
	SRR33742601_1.fastq.gz	Fastqsanger.gz
	SRR33742601_2.fastq.gz	Fastqsanger.gz
	SRR33742602_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 48

Similar Datasets

Project description:Saliva-derived microcosm biofilms grown on GBR membrane Raw sequence reads

| PRJNA981675 | ENA

Project description:Saliva-derived microcosm biofilms grown on different oral surfaces in vitro

| PRJNA754106 | ENA

Exosomal miRNA profiling of saliva-derived exosomes

Project description:Exosomes were isolared from saliva od healthy individuals and head and neck cancer (HNSCC) patients.miRNA profiling of saliva-derived exosomes was perfomred using nCounter SPRINT system. Samples were grouped according to Healthy and Tumor based on their saliva-derived exosomal miRNA profile.

2022-06-28 | GSE207030 | GEO

Project description:Microbiome modulation effect of peptide LL-31 and D-LL-31 on saliva-derived microcosm biofilms

| PRJNA1031418 | ENA

Streptococcus gordonii transcriptional response to salivary mucin

Project description:All organisms throughout the tree of life sense and respond to their surface environments. To discriminate from among mucosal surface environmental cues, we grew Streptococcus gordonii biofilms over night at 37C on surfaces coated with the salivary mucin MUC5B, or a low density protein fraction derived from human saliva.

2022-05-05 | GSE202049 | GEO

Exosomal miRNA profiling of plasma- and saliva-derived exosomes

Project description:Exosomes were isolated from plasma and saliva of healthy individuals and head and neck cancer (HNSCC) patients. miRNA profiling of plasma- and saliva-derived exosomes was performed using nCounter SPRINT system. Diagnostic panels were selected from the exosomal miRNA profile.

2022-08-31 | GSE209670 | GEO

Characteristics of Human and Microbiome RNA Profiles in Saliva

Project description:Saliva is a convenient non-invasive source of liquid biopsy to monitor human health and diagnose diseases. In particular, extracellular vesicles (EVs) in saliva can potentially reveal clinically relevant information for systemic health. Recent studies have shown that RNA in saliva EVs could be exploited as biomarkers for disease diagnosis. However, there is no standardized protocol for profiling RNA in saliva EV nor clear guideline on selecting saliva fractions for biomarker analysis. To address these issues, we established a robust protocol for small RNA profiling from fractionated saliva. With this method, we performed comprehensive small RNA sequencing of four saliva fractions, including cell-free saliva (CFS), EV-depleted saliva (EV-D), exosome (EXO), and microvesicle (MV) from ten healthy volunteers. Methods: To address these issues, we established a robust protocol for small RNA profiling from fractionated saliva. With this method, we performed comprehensive small RNA sequencing of four saliva fractions, including cell-free saliva (CFS), EV-depleted saliva (EV-D), exosome (EXO), and microvesicle (MV) from ten healthy volunteers.

2023-01-07 | GSE222014 | GEO

human oral metagenome

Project description:CDFF-model microcosm biofilm samples from human saliva Metagenome

| PRJNA275963 | ENA

Project description:Porphyromonas-gingivalis-enriched microcosm biofilms

| PRJNA643400 | ENA

Project description:Microcosm biofilm samples from human saliva

| PRJNA575687 | ENA