Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Soil microbes and nutrient inputs influence root nodulation and tree performance in Alnus glutinosa

ABSTRACT: Soil microbes and nutrient inputs influence root nodulation and tree performance in Alnus glutinosa Raw sequence reads

PROVIDER: PRJNA1272542 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Gene profiling during symbiosis between the actinorhizal tree Alnus glutinosa and the actinobacteria Frankia alni ACN14

Project description:Alnus glutinosa belongs to a family of angiosperms called actinorhizal plants because they can develop nitrogen-fixing nodules in association with the soil bacteria Frankia. The aim of this transcriptomic study was to get a global view of the plant symbiotic genetic program and to identify new key plant genes that control nodulation during symbiosis in A. glutinosa. Symbiosis between A. glutinosa and Frankia was obtained after inoculation of young plant with a concentrated culture of the bacteria. Inoculation was performed in a medium depleted in nitrogen which favors the induction of nitrogen fixing symbiosis. For this study we considered two stages of symbiosis: - an early stage where inoculated roots were harvested 7 days after inoculation with the bacteria and compared to two controls (non-inoculated roots grown with or without nitrogen and harvested at the same time) - a late stage where nodules (nitrogen-fixing specific organs) were harvested 21 days after inoculation and compared to non-inoculated roots harvested on the day of inoculation (which is our reference time 0d). Three biological replicates were used for each condition.

2011-04-11 | GSE24153 | GEO

Gene profiling during symbiosis between the actinorhizal tree Alnus glutinosa and the actinobacteria Frankia alni ACN14

2011-04-11 | E-GEOD-24153 | biostudies-arrayexpress

Alnus glutinosa

Project description:Alnus glutinosa overview

| PRJNA155397 | ENA

Alnus glutinosa

Project description:Alnus glutinosa GBS

| PRJNA233424 | ENA

Soil microbes and nutrient inputs influence root nodulation and tree performance in Alnus glutinosa

Project description:Microbial influence on root nodulation

| PRJEB90186 | ENA

Proteomics analysis of a menage a trois: Frankia alni, Alnus glutinosa, and Phytophthora alni.

Project description:The proteomes of the nitrogen-fixin bacterium Frankia alni, the tree Alnus glutinosa (Alder), and the oomycete plant pathogen Phytophthora alni were established by shotgun proteomics in specific conditions to assess Alnus glutinosa responsiveness to Phytophthora alni infection in presence of Frankia alni.

2025-03-25 | PXD040943 | Pride

Alnus glutinosa

Project description:Gene profiling during symbiosis between the actinorhizal tree Alnus glutinosa and the actinobacteria Frankia alni ACN14

| PRJNA130037 | ENA

Proteomics analysis of Phytophthora alni infection in Frankia alni and Alnus glutinosa symbiotic nodules.

Project description:The proteomics analysis of the nitrogen-fixin bacterium Frankia alni, the tree Alnus glutinosa (Alder), and the oomycete plant pathogen Phytophthora alni was carried out by shotgun proteomics from nodules to establish the defence mechanisms of the symbiont during an infection.

2025-03-25 | PXD044187 | Pride

Transcriptome of Alnus glutinosa during nodulation with Frankia and infected with a pathogen

Project description:Gene expression (RNAseq) of Alnus glutinosa after nodulation with Frankia alni ACN14a and infected (or not) with Phytophthora alni sp alni (root and leaf tissus)

| PRJEB61212 | ENA

Ectomycorrhizal fungi communities associated with North African Alnus glutinosa forests

Project description:PacBio metabarcoding (rRNA ITS) of Alnus glutinosa root samples, Algeria

| PRJEB94942 | ENA