Project description:Seed developmental arrest is one of the early phenotypes of seed abortion. However, the molecular mechanism underlying seed developmental arrest of citrus is still unclear. In this study, laser capture microdissection (LCM) was used to accurately divide the seeds of seedless Ponkan ‘Huagan No.4’ (Citrus reticulata) (HG) and seeded Ponkan ‘Egan No.1’ (Citrus reticulata) (EG) into nucellus and integument/seed coat tissues. The captured tissues were used for subsequent RNA-seq. Moreover, single-molecule real-time (SMRT) sequencing was used to generate full-length transcripts of EG, which were used as reference transcripts for RNA-seq. These data can be utilized to analyse the causes of citrus seedlessness formation and the molecular regulatory network in the process of seed abortion.

2023-05-08 | GSE197716 | GEO

Citrus sinensis x Citrus trifoliata

Project description:Citrus sinensis x Citrus trifoliata overview

| PRJNA668214 | ENA

Citrus trifoliata

Project description:Citrus trifoliata CDS

| PRJNA429722 | ENA

Citrus trifoliata

Project description:Citrus trifoliata Epigenomics

| PRJNA555749 | ENA

Citrus reticulata x Citrus sinensis

Project description:Citrus reticulata x Citrus sinensis overview

| PRJNA1299678 | ENA

Citrus reticulata

Project description:citrus reticulata

| PRJNA1086459 | ENA

Expression data from postharvest Ponkan (Citrus reticulata Blanco) fruit under cold storage

Project description:Low temperature storage of citrus fruits are susceptible to chilling disorder symptoms that impact fruit quality. Understanding the molecular frame underlying the cold storage process will provide a basic guidance for practical control. We used Affymetrix Citrus GeneChip to examine the transcriptional changes in cold-stored Citrus reticulata Blanco cv. ‘Ponkan’ pulp tissue for three successive months.

2009-12-18 | GSE19543 | GEO

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