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Magallana gigas

ABSTRACT: Transcriptome sequencing of Pacific oyster Crassostrea gigas

PROVIDER: PRJNA154617 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR334260.fastq.gz	Fastqsanger.gz
	SRR334261.fastq.gz	Fastqsanger.gz
	SRR334323.fastq.gz	Fastqsanger.gz
	SRR334324.fastq.gz	Fastqsanger.gz
	SRR334325.fastq.gz	Fastqsanger.gz

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Transcriptome sequencing of Pacific oyster Crassostrea gigas

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Transcriptome sequencing of Pacific oyster Crassostrea gigas

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Project description:Oyster Crassostrea gigas Transcriptome

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miRNA of Pacific oyster Crassostrea gigas for different organs and developmental stages

Project description:miRNA sequencing of Pacific oyster Crassostrea gigas for different organs and developmental stages. Two RNA pools were created and sequenced by mixing the samples before and after the developmental stage "D shaped larvae". Then ten developmental samples and eleven samples from 7 organs were sequenced.

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Project description:Marine intertidal organisms commonly face hypoxic stress during low tide emersion; moreover, eutrophic conditions and sediment nearness could lead to hypoxic phenomena; it is indeed important to understand the molecular processes involved in the response to hypoxia. In this study the molecular response of the Pacific oyster Crassostrea gigas to prolonged hypoxia (2 mg O2 L-1 for 20 d) was investigated under experimental conditions. A transcriptomic approach was employed using a cDNA microarray of 9058 C. gigas clones to highlight the genetic expression patterns of the Pacific oyster under hypoxic conditions. Lines of oysters resistant (R) and susceptible (S) to summer mortality were used in this study. This is the first study employing microarrays to characterize the genetic markers and metabolic pathways responding to hypoxic stress in C. gigas.

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Project description:MethylRAD of mantles of the Pacific oyster Crassostrea gigas

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Project description:Transcriptome response to salinity stress in the Pacific oyster Crassostrea gigas

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Project description:Pacific oyster Crassostrea gigas Genome sequencing and assembly

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