Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Stachybotrys chartarum IBT 40288

ABSTRACT: Genome sequencing of toxigenic black mold Stachybotrys chartarum IBT 40288

PROVIDER: PRJNA170468 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR628246.fastq.gz	Fastqsanger.gz
	SRR628246_1.fastq.gz	Fastqsanger.gz
	SRR628246_2.fastq.gz	Fastqsanger.gz
	SRR628247.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 13

Similar Datasets

Stachybotrys chartarum IBT 40293

Project description:Genome sequencing of toxigenic black mold Stachybotrys chartarum IBT 40293

| PRJNA185808 | ENA

Stachybotrys chartarum IBT 7711

Project description:Genome sequencing of the toxigenic black mold Stachybotrys chartarum IBT 7711

| PRJNA185811 | ENA

Stachybotrys chlorohalonatus IBT 40285

Project description:Genome sequencing of toxigenic black mold Stachybotrys chlorohalonata IBT 40285

| PRJNA185807 | ENA

Stachybotrys chartarum

Project description:Stachybotrys chartarum overview

| PRJNA186396 | ENA

Stachybotrys chartarum strain:51-11

Project description:Stachybotrys chartarum strain:51-11 Genome sequencing and assembly

| PRJNA283613 | ENA

Expression data analysis in lungs from mice induced for pulmonary arterial hypertension (PAH) by inhalation of Stachybotrys chartarum spores

Project description:It has been reported that repeated intra-tracheal instillation of S. chartarum spores induced significant pulmonary arterial remodeling in mice, which resulted in pathological changes like human pulmonary arterial hypertension (PAH) and elevation right ventricle systolic pressure. Then, we used microarrays to know the complex molecular mechanisms that underlie pathogenesis of PAH. Isolates of Stachybotrys chartarum were used. Ddy mice were anesthetized and the spore suspension was intratracheally injected 12 times, i.e. 1×104 spores into each mouse at 4-5 day intervals for 8 weeks. Mice were sacrificed one week after the final injection and then examined. Lung tissue specimens from mice model of PAH (n=3) and normal controls (n=3) were obtained. RNA targets preparation were performed according to the manufacturer's protocol using GeneChip(R) 3' IVT Express Kit (Affymetrix). One hundred nanograms of total RNA was converted into double-stranded cDNA template for transcription. In vitro transcription synthesized amplified RNA (aRNA) and incorporated a biotin-conjugated nucleotide. After purification and fragmentation of aRNA, 12.5 ug of them was hybridized to GeneChip(R) Mouse Genome 430 2.0 Array (Affymetrix).The Probe Array was scanned using a GeneChip(R) Scanner 3000 7G.

2010-07-28 | E-GEOD-23178 | biostudies-arrayexpress

Project description:Genome sequencing of toxigenic black mold Stachybotrys

| PRJNA186748 | ENA

Expression data analysis in lungs from mice induced for pulmonary arterial hypertension (PAH) by inhalation of Stachybotrys chartarum spores

2010-07-29 | GSE23178 | GEO

Pseudopithomyces chartarum

Project description:Pithomyces chartarum overview

| PRJNA791042 | ENA

Stachybotrys elegans

Project description:Stachybotrys elegans overview

| PRJNA403929 | ENA