Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Saccharomyces cerevisiae

ABSTRACT: Hog1 bypasses stress-mediated down-regulation of transcription by PolII redistribution and chromatin remodeling

PROVIDER: PRJNA177335 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR585731.fastq.gz	Fastqsanger.gz
	SRR585732.fastq.gz	Fastqsanger.gz
	SRR585733.fastq.gz	Fastqsanger.gz
	SRR585734.fastq.gz	Fastqsanger.gz
	SRR585735.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 15

Similar Datasets

Saccharomyces cerevisiae

Project description:Hog1 bypasses stress-mediated downregulation of transcription by PolII redistribution and chromatin remodeling

| PRJNA177031 | ENA

Hog1 bypasses stress-mediated downregulation of transcription by PolII redistribution and chromatin remodeling

Project description:Hog1 bypasses stress-mediated downregulation of transcription by PolII redistribution and chromatin remodeling Keyword: genetic modification

2012-10-30 | GSE41451 | GEO

Hog1 bypasses stress-mediated downregulation of transcription by PolII redistribution and chromatin remodeling

Project description:Hog1 bypasses stress-mediated downregulation of transcription by PolII redistribution and chromatin remodeling Keyword: genetic modification Three independent 200 ml cultures of wild-type strain were grown to mid-log phase in YPD rich medium at 30ºC

2012-10-30 | E-GEOD-41451 | biostudies-arrayexpress

Saccharomyces cerevisiae

Project description:Hog1 ChIP Chip

| PRJNA95747 | ENA

Saccharomyces cerevisiae S288c

Project description:Role of Hog1 in oxygen regulation of gene expression

| PRJNA136189 | ENA

Saccharomyces cerevisiae

Project description:PolII occupancy

| PRJNA104257 | ENA

Hog1 bypasses stress-mediated down-regulation of transcription by PolII redistribution and chromatin remodeling

Project description:Cells are subjected to dramatic changes on gene expression upon environmental changes. Stress causes a general down-regulation of gene expression together with the induction of a set of stress-responsive genes. Genome wide localisation studies showed major changes on Pol II localisation towards stress-responsive genes in contrast to housekeeping genes. Pol II relocalisation requires of the Hog1 SAPK, which also associates at stress-responsive loci. Chromatin structure was not significantly altered upon stress except for those genes that displayed Hog1 association. Together, Hog1 serves to bypass the general down-regulation of gene expression by targeting RNA Pol II machinery and inducing chromatin remodeling at stress-responsive loci. Hog1 and Pol II ChIP-Seq and Mnase-Seq experiments in both strains WT and Hog1 mutant, for 2 conditions: Exposed and not exposed to osmostress

2012-10-30 | E-GEOD-41494 | biostudies-arrayexpress

Saccharomyces cerevisiae

Project description:hog1 mutant 3 hour exposure to zymolyase

| PRJNA114685 | ENA

Hog1 bypasses stress-mediated down-regulation of transcription by PolII redistribution and chromatin remodeling

2012-10-30 | GSE41494 | GEO

The role of the Hog1 and Slt2 MAP Kinases in the regulation of Saccharomyces cerevisiae gene expression upon stress by sulfuric acid

Project description:In our previous work, we had found that Saccharomyces cerevisiae needs of the Hog1 and Slt2 proteins to growth in a low pH environment caused by sulfuric acid, one of the stress factors during the process of ethanol production. Then was performed the gene-wide expression analysis in the hog1∆ and slt2∆ mutants in order to reveal the function of the Hog1p and Slt2p MAP Kinases in the regulation of S. cerevisiae global gene expression upon stress by sulfuric acid.

2013-10-18 | GSE51353 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data