Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Xenorhabdus nematophila

ABSTRACT: RNA-seq analysis of Xenorhabdus nematophila

PROVIDER: PRJNA194148 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR786945.fastq.gz	Fastqsanger.gz
	SRR786946.fastq.gz	Fastqsanger.gz
	SRR786947.fastq.gz	Fastqsanger.gz
	SRR786948.fastq.gz	Fastqsanger.gz

Items per page:

1 - 4 of 4

Similar Datasets

Xenorhabdus nematophila

Project description:Xenorhabdus nematophila FliZ regulon identification by RNA-Seq

| PRJNA205296 | ENA

Xenorhabdus nematophila strain:SII

Project description:Xenorhabdus nematophila strain:SII Genome sequencing

| PRJNA657869 | ENA

C. elegans young adults: Exposed to Xenorhabdus nematophila versus exposed to E. coli OP50 : 4 hours

Project description:Transcriptional profiling of C. elegans young adult worms exposed to pathogen Xenorhabdus nematophila for 4 hours versus age-matched worms exposed to control lab food E. coli OP50. The goal was to identify genes regulated in response to pathogen. The broader goal of study was to study evolution of pathogen response by comparing this expression profile to that obtained by exposing the nematode Pristionchus pacificus to the same pathogen. Other experiments which are a part of this study include expression profiling of C. elegans and P. pacificus on other pathogens including Bacillus thuringiensis, Staphylococcus aureus, and Serratia marcescens. One-condition experiments. C. elegans young adults: Exposed to Xenorhabdus nematophila versus exposed to E. coli OP50 : 4 hours. 4 biological replicates for each condition, including 2 dye-swaps.

2012-03-21 | E-GEOD-36501 | biostudies-arrayexpress

P. pacificus young adults: Exposed to Xenorhabdus nematophila versus exposed to E. coli OP50 : 4 hours

Project description:Transcriptional profiling of P. pacificus young adult worms exposed to pathogen Xenorhabdus nematophila for 4 hours versus age-matched worms exposed to control lab food E. coli OP50. The goal was to identify genes regulated in response to pathogen. The broader goal of study was to study evolution of pathogen response by comparing this expression profile to that obtained by exposing the nematode C. elegans to the same pathogen. Other experiments which are a part of this study include expression profiling of C. elegans and P. pacificus on other pathogens including Bacillus thuringiensis DB27, Staphylococcus aureus, and Serratia marcescens. One-condition experiments. P. pacificus young adults: Exposed to Xenorhabdus nematophila versus exposed to E. coli OP50 : 4 hours. 4 biological replicates for each condition, including 2 dye-swaps.

2012-03-21 | E-GEOD-36523 | biostudies-arrayexpress

Xenorhabdus nematophila strain:Duz-14

Project description:Xenorhabdus nematophila strain:Duz-14 Genome sequencing

| PRJNA1117817 | ENA

Transcriptomic analysis of Steinernema nematodes highlights metabolic costs associated to Xenorhabdus endosymbiont association and rearing conditions

Project description:We investigate the potential metabolic costs for Steinernema nematode in relation to the maintenance and vectoring of their Xenorhabdus endosymbionts. we performed a comparative dual RNA-seq analysis of infective juveniles (IJs) of two symbiotic partners: S. carpocapsae-X. nematophila and S. puntauvense-X. bovienii.

2022-03-16 | GSE185177 | GEO

Xenorhabdus nematophila strain:SC 0516 | isolate:JISC2016

Project description:Xenorhabdus nematophila strain SC 0516

| PRJNA644662 | ENA

Xenorhabdus nematophila strain F1

Project description:Draft genome of the entomopathogenic bacterium Xenorhabdus nematophila strain F1

| PRJEB1529 | ENA

P. pacificus young adults: Exposed to Xenorhabdus nematophila versus exposed to E. coli OP50 : 4 hours

2012-03-21 | GSE36523 | GEO

C. elegans young adults: Exposed to Xenorhabdus nematophila versus exposed to E. coli OP50 : 4 hours

2012-03-21 | GSE36501 | GEO