Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Saccharomyces cerevisiae

ABSTRACT: Sacharomyces cerevisiae Transcript Isoform mapping (rrp6)

PROVIDER: PRJNA197347 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR830346_1.fastq.gz	Fastqsanger.gz
	SRR830346_2.fastq.gz	Fastqsanger.gz
	SRR830347_1.fastq.gz	Fastqsanger.gz
	SRR830347_2.fastq.gz	Fastqsanger.gz
	SRR830348_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

Sacharomyces cerevisiae Transcript Isoform mapping (set2)

Project description:Sacharomyces cerevisiae Transcript Isoform mapping (set2)

| PRJNA488283 | ENA

Saccharomyces cerevisiae

Project description:Saccharomyces cerevisiae Transcript Isoform mapping

| PRJNA170101 | ENA

Expression data from Saccharomyces cerevisiae strains expressing human RECQL5 helicase

Project description:We expressed human RECQL5 in the model organism Sacharomyces cerevisiae. We found that RECQL5 overexpression in yeast leads to cell growth inhibition and increased genotoxic sensitivity. We carried-out transcriptome analysis of yeast strains overexpressing human RECQL5 helicase to explore its impact on gene expression.

2025-01-15 | GSE180112 | GEO

Human helicase RECQL5-Flag ChIP DNA from Saccharomyces cerevisiae strain W303-1AR5, asynchronous culture

Project description:We expressed human RECQL5 in the yeast model Sacharomyces cerevisiae. Being RECQL5 the only member of the family shown to interact with the RNA polymerase II we explored the recruitment of RECQL5 to chromatin. Data reveal a genome wide recruitment of RECQL5 at actively transcribed regions that increases toward the 3’ end of the gene.

2025-01-15 | GSE180107 | GEO

Saccharomyces cerevisiae

Project description:rrp6 delta and rrp6 delta, trf4 delta vs WT

| PRJNA91985 | ENA

Saccharomyces cerevisiae W303

Project description:S. cerevisiae Nucleosome mapping

| PRJNA205194 | ENA

ChIP-seq of Sgo1p on mitotic chromosomes of Saccharomyces cerevisiae

Project description:We report the genome-wide localization of Sgo1p in mitosis of Saccharomyces cerevisiae using ChIP-seq. The high resolution mapping clearly shows a tripartite domain of Sgo1p in each mitotic chromosome. This domain requires the wildtype tension sensing motif (TSM) of histone H3.

2018-09-01 | GSE110953 | GEO

Saccharomyces cerevisiae

Project description:Saccharomyces cerevisiae DNA:RNA hybrid mapping

| PRJNA314359 | ENA

Saccharomyces cerevisiae 3' poly(A) site mapping

Project description:The use of alternative polyadenylation sites is common and affects the post-transcriptional fate of mRNA, including its stability, localization, and translation. Here we present a method for genome-wide and strand-specific mapping of poly(A) sites and quantification of RNA levels at unprecedented efficiency by using an on-cluster dark T-fill procedure on the Illumina sequencing platform. Our method outperforms former protocols in quality and throughput, and reveals new insights into polyadenylation in Saccharomyces cerevisiae. Experimental benchmark of five different protocols (3tfill, bpmI, internal, rnaseq and yoon) for genome-wide identification of polyadenylation sites in Saccharomyces cerevisiae and transcript quantification. RNA was extracted from WT cells grown in glucose (ypd) or galactose (ypgal) as carbon source. The same RNA was used for 3 independent library constructions (technical replicates, rep).

2013-01-10 | E-GEOD-40110 | biostudies-arrayexpress

Saccharomyces cerevisiae

Project description:Transcript analyses of cisplatin and Sky1 effects in Saccharomyces cerevisiae

| PRJNA175816 | ENA