Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Sinapis alba strain:S2 GC0560-79

ABSTRACT: Sinapis alba strain:S2 GC0560-79 Genome sequencing and assembly

PROVIDER: PRJNA214277 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR10140572_1.fastq.gz	Fastqsanger.gz
	SRR10140572_2.fastq.gz	Fastqsanger.gz
	SRR1799170_1.fastq.gz	Fastqsanger.gz
	SRR1799170_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 9

Similar Datasets

Sinapis alba

Project description:Sinapis alba Assembly

| PRJNA555828 | ENA

Transcriptome modulation combined with morpho-physiological analyses of Sinapis alba L in response to cadmium challenge

Project description:The purpose of this study is to explore the influence of the morpho-physiological of Sinapis alba L in response to cadmium challenge

2021-09-05 | GSE183342 | GEO

Sinapis alba

Project description:Sinapis alba overview

| PRJNA286812 | ENA

Sinapis alba

Project description:Sinapis alba Raw sequence reads

| PRJNA304264 | ENA

Sinapis alba strain:B1D

Project description:Sinapis alba strain:B1D Transcriptome or Gene expression

| PRJNA244703 | ENA

Characterization vy crosslinking-mass spectrometry of plastid-encoded RNA polymerase purified from Sinapis alba.

Project description:RNA polymerases (RNAPs) transcribe DNA into RNA and are found in all living organisms with several degrees of complexity from single polypeptide chain to multimeric enzymes. In chloroplast of angiosperms, two RNAPs are involved in plastid gene transcription: the nuclear-encoded RNA polymerase (NEP) and the plastid-encoded RNA polymerase (PEP). The PEP is a prokaryotic-type multimeric RNAP found in different states depending on light stimuli and cell identity. One of these active states requires the assembly of nuclear-encoded proteins named PEP-Associated Proteins (PAPs) with the catalytic core, triggering the timely transcription of photosynthesis-associated plastid genes in cells acquiring their photosynthetic apparatus. A purification procedure was used to enrich native PEP from Sinapis alba chloroplasts. Crosslinking coupled to mass spectrometry provided initial structural information about the relative position of PEP subunits within the complex.

2022-09-12 | PXD032739 | Pride

Mass spectrometry-based proteomic characterization of plastid-encoded RNA polymerase purified from Sinapis alba.

Project description:RNA polymerases (RNAPs) transcribe DNA into RNA and are found in all living organisms with several degrees of complexity from single polypeptide chain to multimeric enzymes. In chloroplast of angiosperms, two RNAPs are involved in plastid gene transcription: the nuclear-encoded RNA polymerase (NEP) and the plastid-encoded RNA polymerase (PEP). The PEP is a prokaryotic-type multimeric RNAP found in different states depending on light stimuli and cell identity. One of these active states requires the assembly of nuclear-encoded proteins named PEP-Associated Proteins (PAPs) with the catalytic core, triggering the timely transcription of photosynthesis-associated plastid genes in cells acquiring their photosynthetic apparatus. A purification procedure was used to enrich native PEP from Sinapis alba chloroplasts. Mass spectrometry-based proteomic analysis of the obtained fraction identified the expected subunits, i.e. the core components and the PAPs as the most abundant proteins.

2022-09-12 | PXD032738 | Pride

Methylotenera versatilis 79 strain:79

Project description:Methylotenera versatilis 79 strain:79 Genome sequencing and assembly

| PRJNA157083 | ENA

Leptidea sinapis

Project description:Leptidea sinapis overview

| PRJNA724779 | ENA

Sinapis arvensis

Project description:Sinapis arvensis overview

| PRJNA353526 | ENA