Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Ehrlichia muris

ABSTRACT: Ehrlichia muris overview

PROVIDER: PRJNA232096 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR1029850_consensus.fastq.gz	Fastqsanger.gz
	SRR1029851_consensus.fastq.gz	Fastqsanger.gz
	SRR1029852_1.fastq.gz	Fastqsanger.gz
	SRR1029852_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 5

Similar Datasets

Ehrlichia muris

Project description:Ehrlichia muris sequencing from Italy

| PRJNA1098473 | ENA

RNA-seq analysis of Ehrlichia muris infection induced murine splenic and hepatic memory B cells subsets.

Project description:Purpose: The goal of this study is to complare the transcitpional profiles of freshly isolated, murine splenic and hepatic memory B cells (B220+ CD73+) sorted as CD11b, CD11c double negative and CD11b, CD11c double positive cell populations induced by Ehrlichia muris infection.

2019-09-10 | GSE137154 | GEO

Ehrlichia muris AS145 strain:AS154

Project description:Ehrlichia muris AS145 strain:AS154 Genome sequencing

| PRJNA228704 | ENA

Ehrlichia muris subsp. eauclairensis strain:Wisconsin

Project description:Ehrlichia muris subsp. eauclairensis strain:Wisconsin Genome sequencing

| PRJNA935299 | ENA

Transcriptional analysis of murine CXCR3+ vs. CXCR3- peritoneal cavity B cells 8 days following infection with Ehrlichia muris.

Project description:We performed bulk RNA sequencing on murine CXCR3+ and CXCR3-negative live singlet IgM+ IgD-neg CD19+ CD138-neg (B1 B cell-like) peritoneal cavity B cells to compare the transcriptomes of the two populations following i.p. infection with the intracellular bacterium Ehrlichia muris. Total RNA was extracted and sequenced, followed by pseudoalignment, quality assessment, normalization, and analysis of differential gene expression. The CXCR3+ B1 B cell-like population was highly enriched for genes involved in proliferation, metabolism, and cell division, whereas the CXCR3- B1 B cell-like population transcriptionally resembled canonical B1 B cells and did not appear to be proliferative. These results suggest local proliferation of CXCR3+ B cells occurs in the peritoneal cavity during acute infection with an intracellular bacterium.

2022-04-18 | GSE190651 | GEO

Ehrlichia

Project description:Ehrlichia sp. overview

| PRJNA917365 | ENA

Ehrlichia minasensis

Project description:Ehrlichia minasensis overview

| PRJNA522639 | ENA

Brachybacterium muris

Project description:Brachybacterium muris overview

| PRJNA37133 | ENA

Trichuris muris

Project description:Trichuris muris overview

| PRJNA305065 | ENA

Trichuris muris transcriptomics

Project description:Trichuris muris is very closely related to the human parasite T. trichiura sharing cross reactive antigens. Moreover, it is a remarkably tractable model system for dissecting immune responses and host parasite relationships and is actively being investigated in a number of laboratories worldwide. T. muris is a naturally occurring nematode parasite of mice which resides in the caecum and colon and has a direct oral faecal life cycle. High-throughput sequencing of Trichuris muris transcriptome for de novo assembly of transcripts. The main objective of this project is to recognize genes expressed in given life stages. This data is part of a pre-publication release. For information on the proper use of pre-publication data shared by the Wellcome Trust Sanger Institute (including details of any publication moratoria), please see http://www.sanger.ac.uk/datasharing/

2013-05-28 | E-ERAD-125 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data