Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Amphimedon queenslandica

ABSTRACT: A high-resolution Amphimedon queenslandica transriptomic timecourse

PROVIDER: PRJNA236322 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR1141180.fastq.gz	Fastqsanger.gz
	SRR1141190.fastq.gz	Fastqsanger.gz
	SRR1141200.fastq.gz	Fastqsanger.gz
	SRR1141210.fastq.gz	Fastqsanger.gz
	SRR1141220.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 59

Similar Datasets

Amphimedon queenslandica

Project description:Amphimedon queenslandica high resolution developmental transcriptomic time-course

| PRJNA258388 | ENA

A high-resolution Amphimedon queenslandica transriptomic timecourse

Project description:Transcriptomic data for 59 single embryos and larvae samples of the sponge Amphimedon queenslandica

2014-01-24 | GSE54364 | GEO

A high-resolution Amphimedon queenslandica transriptomic timecourse

Project description:Transcriptomic data for 59 single embryos and larvae samples of the sponge Amphimedon queenslandica Transcriptomic data for 59 single embryos and larvae samples of the sponge Amphimedon queenslandica

2014-01-24 | E-GEOD-54364 | biostudies-arrayexpress

Amphimedon queenslandica

Project description:Amphimedon queenslandica genome sequencing project

| PRJNA39517 | ENA

Amphimedon queenslandica

Project description:Amphimedon queenslandica deep developmental transcriptomes

| PRJNA255066 | ENA

Amphimedon queenslandica

Project description:Amphimedon queenslandica and its bacterial symbionts

| PRJNA668660 | ENA

Amphimedon queenslandica

Project description:Amphimedon queenslandica Transcriptome or Gene expression

| PRJNA275921 | ENA

Amphimedon queenslandica holobiont

Project description:Amphimedon queenslandica holobiont Raw sequence reads

| PRJNA982967 | ENA

Amphimedon queenslandica

Project description:Transcriptome of the demosponge Amphimedon queenslandica at life cycle transitions

| PRJNA140763 | ENA

Transcriptome of the demosponge Amphimedon queenslandica at life cycle transitions

Project description:Poriferans, like the demosponge Amphimedon queenslandica, are the earliest diverging metazoans and may hold the key to understanding the evolution of metazoan pathways. A. queenslandica exhibits a biphasic lifecycle, with free-swimming larvae and sessile adult stages. To study changes in the transcriptome during this period of morphological and ecological transition, we generated poly(A) fragment libraries for A. queenslandica at four developmental stages: precompetent and competent larvae, postlarvae, and adult. These libraries were sequenced using Applied Biosystems SOLiD technology. This study provides the most comprehensive analysis to date of gene expression in the sponge. It has elucidated the genes that define the two main phases of the sponge lifestyle and identified genes that are important for competence and metamorphosis. More importantly, this study has provided insights into the expression of the genes that characterize metazoan features, such as cell adhesion and differentiation, in an early metazoan.

2012-07-10 | GSE29978 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data