Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Camellia oleifera

ABSTRACT: source of tea-oil

PROVIDER: PRJNA240132 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
		Other
	validation_population_SNP_data_8.vcf.gz	Vcf
	validation_population_SNP_data_8.vcf.gz.tbi	Vcf
	association_population_SNP_data-8.vcf.gz	Vcf

Items per page:

1 - 5 of 1496

Similar Datasets

Camellia oleifera

Project description:Leaf transcriptomes of wild oil-tea camellia from different latitudes and elevations

| PRJNA292037 | ENA

Identification of important genetic resources of tea oil accumulation and quality formation in Camellia oleifera based on gene expression

Project description:To identify the important genetic resources of tea oil accumulation and quality formation in Camellia oleifera, an important woody edible oil tree native to Southern China, we have designed and customized an expression profile chip of C. oleifera with 8×60 K on the basis of transcriptome sequencing of multiple tissue samples including kernels, roots, and leaves from multiple varieties. we used the mcroarrays to determine the gene expressions in kernel development of C. oleifera elite varieties'Huashuo' , 'Huaxin' , 'Huajin' and 'Jujian' respectively. Microarray results indicated a total of 10710 gene probes showed stable differential expression in the comparation of August vs June and 9987 in the comparation of October vs August. PATHWAY enrichment results of DEGs indicated that the oil synthesis and accumulation occured in the whole kernel development of C. oleifera, but were mainly concentrated from the nutrition high-speed synthesis period to the seed mature period, which was consistent with the variation trend of oil content and fatty acide composition in C. oleifera kernel development.

2020-03-11 | GSE146709 | GEO

Camellia oleifera seed transcriptomics

Project description:We report the expression analysis of seed kernel in Camellia oleifera cultivars. In total 221 cultivars are sequenced by the Illumina sequencing experiments to obtain the gene expression profiles.

2021-12-12 | GSE190644 | GEO

an evergrowing tea (Camellia sinensis L.) cultivar

Project description:Tea (Camellia sinensis (L.) O. Kuntze) is an important non-alcoholic commercial beverage crop. Tea tree is a perennial plant, and winter dormancy is its part of biological adaptation to environmental changes. We recently discovered a novel tea tree cultivar that can generate tender shoots in winter, but the regulatory mechanism of this ever-growing tender shoot development in winter is not clear. In this study, we conducted a proteomic analysis for identification of key genes and proteins differentially expressed between the winter and spring tender shoots, to explore the putative regulatory mechanisms and physiological basis of its ever-growing character during winter.

2022-02-23 | PXD008958 | Pride

Xinyang Maojian green tea (Camellia sinensis) microRNAs data in different leaf development stages.

Project description:The microRNAs reveal the molecular mechanism involved in the regulation of leaf development in Xinyang Maojian green tea.

2023-03-05 | GSE224544 | GEO

Expression profiling changes during different albescent stages of 'Anji Baicha' (Camellia sinensis)

Project description:The RNA-Seq was used to analyze the expression profiling of genes in different ablescent stages of 'Anji Baicha' Examination of three tea leaf samples in yellow stage, white stage and green stage

2016-09-01 | E-GEOD-66615 | biostudies-arrayexpress

Genome-wide identification of microRNAs responsive to Ectropis oblique feeding in the tea plant (Camellia sinensis L.)

Project description:micro RNA identification of tea plant

2017-10-31 | GSE98474 | GEO

Identification and characterization of cold responsive microRNAs in tea plant (Camellia sinensis) based on high-throughput sequencing and their targets using degradome analysis [microarray]

Project description:Solexa sequencing technology was used to perform high throughput sequencing of the small RNA library from the cold treatment of tea leaves. Subsequently, aligning these sequencing date with plant known miRNAs, we characterized 112 C. sinensis conserved miRNAs. In addition, 215 potential candidate miRNAs were found; among them, 131 candidates with star sequence were chosen as novel miRNAs. There are both congruously and differently regulated miRNAs, and line-specific miRNAs were identified by microarray-based hybridization in response to cold stress. The miRNA chip included 3228 miRNA probes corresponding to miRNA transcripts listed in Sanger miRBase release 19.0 and 283 novel miRNAs probes founding in tea plant. In the study presented here, two tea plant cultivars, ‘Yingshuang’ (YS, a cold-tolerant tea plant cultivar) and ‘Baiye 1’ (BY, a cold-sensitive tea plant cultivar), were kept at 4°C for 4,12, 24 h, respectively, and 28°C for as control. These samples were used to acquire expression profiles of a total of 3,511 unique genes, leading to the successful construction of supervised

2015-05-14 | E-GEOD-53632 | biostudies-arrayexpress

Camellia oleifera

Project description:Transcriptome sequencing data of Camellia oleifera

| PRJNA915196 | ENA

Camellia oleifera

Project description:Camellia oleifera Raw sequence reads

| PRJNA824141 | ENA