Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Coprinopsis cinerea

ABSTRACT: PacBio RS sequencing of oxidized methylcytocines in Coprinopsis cinerea

PROVIDER: PRJNA245452 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR1266150_consensus.fastq.gz	Fastqsanger.gz
	SRR1266160_consensus.fastq.gz	Fastqsanger.gz
	SRR1266170_consensus.fastq.gz	Fastqsanger.gz
	SRR1266180_consensus.fastq.gz	Fastqsanger.gz
	SRR1266190_consensus.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 120

Similar Datasets

5mC oxidation products in the nucleic acids of the Basidiomycete fungi Laccaria bicolor and Coprinopsis cinerea

Project description:We analyzed oxidized 5-methylcytosine derivatives 5-hydroxymethylcytosine, 5-formylcytosine and 5-carboxylcytosine in nucleic acids of multicellular fungi Laccaria bicolor and Coprinopsis cinerea which have been used as models to study DNA methylation, developmental processes and symbiotic interactions. All three cytosine derivatives were detected in the genomes of both fungi, and importantly, we discovered 5carC in the RNA fractions, potentially including large non-coding, messenger RNAs and small RNA molecules, indicating gene regulatory functions of 5carC.

2022-01-16 | GSE185550 | GEO

Coprinopsis cinerea

Project description:Simultaneous sequencing of oxidized methylcytosines produced by TET/JBP proteins in Coprinopsis cinerea [CMS-seq]

| PRJNA203154 | ENA

Coprinopsis cinerea

Project description:Simultaneous sequencing of oxidized methylcytosines produced by TET/JBP proteins in Coprinopsis cinerea [RNA-seq]

| PRJNA253741 | ENA

omparison of gene expression during meiosis between wild-type and deficient strains of Coprinopsis cinerea

Project description:This SuperSeries is composed of the following subset Series: GSE37942: Comparison of gene expression during meiosis between wild-type and rad50-deficient strains of Coprinopsis cinerea GSE37943: Comparison of gene expression during meiosis between wild-type and msh5-deficient strains of Coprinopsis cinerea Refer to individual Series

2012-05-14 | E-GEOD-37968 | biostudies-arrayexpress

Coprinopsis cinerea

Project description:Coprinopsis cinerea Raw sequence reads

| PRJNA1213247 | ENA

Coprinopsis cinerea

Project description:Coprinopsis cinerea Raw sequence reads

| PRJNA682885 | ENA

Coprinopsis cinerea

Project description:Coprinopsis cinerea Raw sequence reads

| PRJNA1212308 | ENA

Coprinopsis cinerea

Project description:Coprinopsis cinerea Raw sequence reads