Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Root metagenome

ABSTRACT: Quito-Loja arbuscular mycorrhizal fungi Targeted Locus (Loci)

PROVIDER: PRJNA247467 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR1336810.fastq.gz	Fastqsanger.gz
	SRR1336820.fastq.gz	Fastqsanger.gz
	SRR1336830.fastq.gz	Fastqsanger.gz
	SRR1336840.fastq.gz	Fastqsanger.gz
	SRR1336850.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 46

Similar Datasets

root metagenome

Project description:Arbuscular mycorrhizal fungi Targeted Locus (Loci)

| PRJNA242351 | ENA

root metagenome

Project description:Arbuscular mycorrhizal fungi Targeted Locus (Loci)

| PRJNA253276 | ENA

root metagenome

Project description:Arbuscular mycorrhizal fungi Targeted loci environmental

| PRJNA317042 | ENA

rhizosphere metagenome

Project description:Arbuscular mycorrhizal fungi Targeted Locus (Loci)

| PRJNA254390 | ENA

soil metagenome

Project description:Arbuscular mycorrhizal fungi Targeted Locus (Loci)

| PRJNA313532 | ENA

soil metagenome

Project description:Arbuscular mycorrhizal fungi from soil samples Targeted Locus (Loci)

| PRJNA247466 | ENA

Gene expression during early stages of arbuscular mycorrhizal root formation in Medicago truncatula.

Project description:Arbuscular mycorrhiza (AM) interactions between plants and Glomeromycota fungi primarily support phosphate aquisition of most terrestrial plant species. To unravel gene expression during early stages of Medicago truncatula root colonization by AM fungi, we used genome-wide transcriptome profiling based on mycorrhizal root fragments enriched for early fungal infection stages. We used Medicago GeneChips to detail the global programme of gene expression in response to early stages of colonization by arbuscular mycorrhizal fungi and identified genes differentially expressed during these early stages.

2012-03-28 | GSE34617 | GEO

root metagenome

Project description:Arbuscular mycorrhiza Targeted Locus (Loci)

| PRJNA273459 | ENA

root metagenome

Project description:Fungi Targeted Locus (Loci)

| PRJNA284155 | ENA

Gene expression data from Mt/Gigi vs Mt root tissues

Project description:Most vascular flowering plants have the ability to form mutualistic associations with soil fungi from the Glomeromycota. The resulting symbiosis is called an arbuscular mycorrhiza and they are widespread in terrestrial ecosystems throughout the world. Significant alteration occurs at physiological and molecular levels in both symbionts. To gain a better understanding of the AM symbiosis, we use a 16000 feature oligonucleotide based array to examine gene expression in an arbuscular mycorrhizal symbioses, M. truncatula/Gigaspora gigantea. Keywords: Medicago truncatula, Mycorrhizal, Gigaspora gigantea, microarray profiling

2007-03-08 | GSE5471 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data