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Tribolium castaneum strain:GA-1

ABSTRACT: RNAseq analysis of pupal eye development in the red flour beetle Tribolium castaneum

PROVIDER: PRJNA247821 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
	SRR1727820_1.fastq.gz	Fastqsanger.gz
	SRR1727820_2.fastq.gz	Fastqsanger.gz
	SRR1783154.fastq.gz	Fastqsanger.gz
	SRR5961551_1.fastq.gz	Fastqsanger.gz
	SRR5961551_2.fastq.gz	Fastqsanger.gz

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Genome-wide survey of transcriptional differences between males and females of Tribolium castaneum, the red flour beetle

Project description:Genome-wide survey of transcriptional differences between males and females of Tribolium castaneum, the red flour beetle Four biological replicates for male and female beetles with 20 individuals per replicate. Two technical replicates, one replicate per sex. 16,434 genes/expressed non-coding regions represented twice on each array. Three 60 mer probes for most exons/expressed non-coding regions. 167,538 unique genomic probes replicated twice per array.

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Project description:The presence of DNA methylation in beetles (Coleoptera) has only been investigated with bisulfite sequencing of Tribolium castaneum, which produced no evidence of DNA methylation. Here, we used whole genome bisulfite sequencing to assay if DNA methylation was present in another beetle, Nicrophorus vespilloides. We used T. castaneum as a negative control.

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