Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Lithobius forficatus

ABSTRACT: The 1KITE project: evolution of insects

PROVIDER: PRJNA254277 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR1653205_1.fastq.gz	Fastqsanger.gz
	SRR1653205_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Lithobius forficatus

Project description:Lithobius forficatus Transcriptome or Gene expression

| PRJNA237133 | ENA

Lithobius forficatus

Project description:Lithobius forficatus Transcriptome or Gene expression

| PRJNA198080 | ENA

Lithobius forficatus

Project description:Lithobius forficatus overview

| PRJNA198534 | ENA

A novel type of RNA editing occurs in the mitochondrial tRNAs of the centipede Lithobius forficatus.

Project description:We determined the complete mtDNA sequence of the centipede Lithobius forficatus and found that only one of the 22 inferred tRNA genes encodes a fully paired aminoacyl acceptor stem. The other 21 genes encode tRNAs with up to five mismatches in these stems, and some of these overlap extensively with the downstream genes. Because a well-paired acceptor stem is required for proper tRNA functioning, RNA editing in the products of these genes was suspected. We investigated this hypothesis by studying cDNA sequences from eight tRNAs and found the editing of up to 5 nt at their 3' ends. This editing appears to occur by a novel mechanism with the 5' end of the acceptor stem being used as a template for the de novo synthesis of the 3' end, presumably by an RNA-dependent RNA polymerase. In addition, unusual secondary structures for several tRNAs were found, including those lacking a TPsiC (T) or a dihydrouridine (D) arm, and having an unusual number of base pairs in the acceptor or anticodon stems.

| S-EPMC17645 | biostudies-literature

Methana parva

Project description:The 1KITE project: evolution of insects

| PRJNA286405 | ENA

Kosrheithrus remulus

Project description:The 1KITE project: evolution of insects

| PRJNA286627 | ENA

Lepidostoma togatum

Project description:The 1KITE project: evolution of insects

| PRJNA286628 | ENA

Pseudochrysis schmiedeknechti

Project description:The 1KITE project: evolution of insects