Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Tuber melanosporum

ABSTRACT: T. melanosporum isolate genome resequencing

PROVIDER: PRJNA254371 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR1508530.fastq.gz	Fastqsanger.gz
	SRR1508531.fastq.gz	Fastqsanger.gz
	SRR1508522.fastq.gz	Fastqsanger.gz
	SRR1508527.fastq.gz	Fastqsanger.gz
	SRR1508528.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

Tuber melanosporum gene expression in different tissues

Project description:The Transcriptome of different tissues and developmental stages of Tuber melanosporum was analyzed. The array probes were designed from gene models taken from the French Genoscope - Centre National de Séquençage Tuber melanosporum genome sequence version 1. One aim of this study was to verify the expression of the automatically annotated gene models in various tissues and to use this transcriptional information to confirm, to correct or to reject gene models. Another goal was to identify tissue-specific gene expression, e.g. mycorrhiza up-regulated transcripts or fruiting body up-regulated transcripts for further detailed analyses.

2010-04-01 | GSE17529 | GEO

Tuber melanosporum strain:101230-3

Project description:Tuber melanosporum 101230-3 Resequencing genome sequencing

| PRJNA340581 | ENA

Tuber melanosporum strain:101230-4

Project description:Tuber melanosporum 101230-4 Resequencing genome sequencing

| PRJNA340582 | ENA

Tuber melanosporum strain:080222-2

Project description:Tuber melanosporum 080222-2 Resequencing genome sequencing

| PRJNA340579 | ENA

Tuber melanosporum strain:080708-11

Project description:Tuber melanosporum 080708-11 Resequencing genome sequencing

| PRJNA340580 | ENA

Tuber melanosporum strain:110120-5

Project description:Tuber melanosporum 110120-5 Resequencing genome sequencing

| PRJNA340583 | ENA

Tuber melanosporum strain:110120-6

Project description:Tuber melanosporum 110120-6 Resequencing genome sequencing

| PRJNA340584 | ENA

Bisulfite-Seq and RNA-seq profiling of truffle (Tuber melanosporum)

Project description:We investigated the ascomycete truffle Tuber melanosporum exploits DNA methylation and transcription to cope with the more than 45,000 repeated elements that are present in its genome. Whole-genome bisulfite sequencing and RNA-sequencing, were performed on different developmental stages of this symbiotic hypogeous fungus -fruitbody (FB), free-living mycelium (FLM), and ectomycorrhiza.

2014-01-01 | GSE49700 | GEO

Tuber melanosporum

Project description:Bisulfite-Seq and RNA-seq profiling of truffle (Tuber melanosporum)

| PRJNA214782 | ENA

Gene expression in Tuber melanosporum fruiting bodies at different developmental stages

Project description:This study characterizes the transcriptomic alterations of Tuber melanosporum during fruiting body development. Stage III, IV, V and VI were analyzed. For images and description of stages see Zarivi et al.2015 (https://doi.org/10.1016/j.phytochem.2015.02.024)

2018-01-15 | GSE108014 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data