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Homo sapiens

ABSTRACT: RNA-sequencing study of peripheral blood monocytes for chronic periodontitis

PROVIDER: PRJNA261294 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR1576820.fastq.gz	Fastqsanger.gz
	SRR1576821.fastq.gz	Fastqsanger.gz
	SRR1576822.fastq.gz	Fastqsanger.gz
	SRR1576823.fastq.gz	Fastqsanger.gz
	SRR1576824.fastq.gz	Fastqsanger.gz

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RNA-sequencing study of peripheral blood monocytes for chronic periodontitis

Project description:We confirmed immune response as the key mechanism and provided solid evidence for novel genes (e.g., FCAR and CUX1) and distinct biological processes (e.g., endocytosis, cytokine production and apoptosis) as potentially new important factors/mechanisms contributing to chronic periodontitis pathogenesis. We performed an RNA-sequencing (RNA-seq) study of peripheral blood monocytes (PBMs) in 5 non-smoking moderate to severe CP (case) subjects vs. 5 controls. We replicated the DEx transcripts/isoforms using an independent microarray dataset. We also pathway-based analysis on the identified/replicated DEx transcripts/isoforms using DAVID performed (Database for Annotation, Visualization and Integrated Discovery).

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