Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Freshwater metagenome

ABSTRACT: Bacterioplankton communites in freshwater lake, Dianchi lake Metagenome

PROVIDER: PRJNA279700 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR1947263.fastq.gz	Fastqsanger.gz
	SRR1947268.fastq.gz	Fastqsanger.gz
	SRR1947069.fastq.gz	Fastqsanger.gz
	SRR1982370.fastq.gz	Fastqsanger.gz
	SRR1982380.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 60

Similar Datasets

freshwater metagenome

Project description:Freshwater lake Metagenome

| PRJNA244610 | ENA

freshwater metagenome

Project description:Freshwater lake Metagenome

| PRJNA238161 | ENA

Freshwater lake metagenome

Project description:Freshwater lake metagenome Metagenome

| PRJNA578039 | ENA

freshwater metagenome

Project description:Metagenome of Freshwater Lake

| PRJNA993022 | ENA

freshwater metagenome

Project description:Freshwater Lake Onega Metagenome

| PRJNA248048 | ENA

freshwater metagenome

Project description:Freshwater metagenome from Lake Llebreta

| PRJEA46645 | ENA

Marine and freshwater three-spined stickleback (Gasterosteus aculeatus) gene expression differences

Project description:In order to identify gene expression difference between marine and freshwater stickleback populations, we compared the transcriptomes of seven adult tissues (eye, gill, heart, hypothalumus, liver, pectoral muscle, telencephalon) between a marine population sampled from the mouth of the Little Campbell river in British Columbia (LITC) and a freshwater population (Fishtrap Creek, FTC) from northern Washington. For each population, the sampled individuals were the lab-reared progeny of a single pair of wild-caught parents. Four to five fish from each population were used as biological replicates for each of the seven tissues. For each population, the sampled individuals were the lab-reared progeny of a single pair of wild-caught parents. All fish were of similar age and were raised in the same aquarium (salinity: 3.5 ppt), with a plastic divider separating the marine and freshwater groups. One male and four females were sampled from each population. Microarray experiments were performed in a 2-color format on custom Agilent arrays: experimental RNA samples were labeled with Cy5, and the common reference RNA sample was labeled with Cy3. The reference RNA was total RNA isolated from a large number of 7-day-post-hatch embryos from the freshwater population of Bear Paw Lake, Alaska (BEPA). One technical replicate was used for each array, and one of the hypothalamus samples (Hyp_FTC#3) was excluded from further analysis due to poor quality indicators. FTC#1 liver and LITC#2 pectoral muscle samples did not yield RNA of sufficient quality for the microarray experiment, and were also excluded from hybridization.

2011-12-30 | E-GEOD-34783 | biostudies-arrayexpress

freshwater metagenome

Project description:Temporal survey of lake bacterioplankton diversity

| PRJNA263673 | ENA

freshwater metagenome

Project description:Taihu Lake freshwater metagenome Raw sequence reads

| PRJNA362480 | ENA

freshwater metagenome

Project description:Viral metagenome from an Antarctic freshwater lake

| PRJNA34669 | ENA