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ABSTRACT: symbiotic germination of dendrobium officinale with Tulasnella sp. and asymbiotic germination Raw sequence reads

PROVIDER: PRJNA279934 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
	SRR1951790_1.fastq.gz	Fastqsanger.gz
	SRR1951790_2.fastq.gz	Fastqsanger.gz
	SRR1951791_1.fastq.gz	Fastqsanger.gz
	SRR1951791_2.fastq.gz	Fastqsanger.gz
	SRR1951792_1.fastq.gz	Fastqsanger.gz

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Project description:Mycorrhizal fungi colonize orchid seed and induce the germination. This so-called symbiotic germination is a critical developmental process in the lifecycle of all orchids. However, the molecular changes taking place during the orchid seed symbiotic germination still remains largely unknown. To better understand the molecular mechanism of orchid seed germination, we performed comparative transcriptomic and proteomic analysis on Chinese traditional medicinal orchid plants, Dendrobium officinale to explore protein expression change at the different developmental stages between asymbiotic and symbiotic germination and identify the key proteins regulated symbiotic germination of orchid seeds. iTRAQ analysis from 8 samples identified 2256 plant proteins, of which, 308 proteins were differentially expressed across three developmental stages within asymbiotic or symbiotic accession and 229 proteins are differentially expressed in the symbiotic germination compared to asymbiotic germination. 32 proteins are co-upregulated in both proteomic and transcriptomic level for symbiotic germination compared to asymbiotic germination. Our results revealed that symbiotic germination of D. officinale seeds probably shares the common signal pathway with asymbiotic germination during the early germination stage.

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