Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Rhodotorula toruloides strain:IFO0880

ABSTRACT: Rhodotorula toruloides strain:IFO0880 Raw sequence reads

PROVIDER: PRJNA283146 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR2011257_1.fastq.gz	Fastqsanger.gz
	SRR2011257_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Gene Expression Profiling of Synechococcus elongatus PCC 7942 and Rhodotorula toruloides NBRC 0880 (Rhodosporidium toruloides IFO0880) in Co-culture and Membrane-Separated Bioreactor Configurations Under Various Stress and Nutrient Conditions

Project description:This RNA-seq study examines transcriptional responses of a cyanobacterium–yeast co-culture system comprising Synechococcus elongatus PCC 7942 and Rhodotorula toruloides NBRC 0880 (Rhodosporidium toruloides IFO0880) under multiple conditions. Experiments included planktonic co-cultures in 50 mL tubes subjected to chemical stressors (oxidative stress, photosynthesis inhibition), temperature stress, nutrient limitation (nitrogen, phosphorus), pH extremes, and heterotrophic conditions, as well as physically separated co-cultures in a 600 mL membrane bioreactor. Axenic controls for Synechococcus elongatus PCC 7942 were included for comparison. Differential gene expression analysis provides insight into interspecies interactions and individual organism responses across co-culture configurations.

2026-06-11 | GSE335065 | GEO

Rhodotorula toruloides strain:IFO0880 pgi132

Project description:Rhodotorula toruloides IFO0880 pgi132 Resequencing

| PRJNA580726 | ENA

Rhodotorula toruloides strain:IFO0880 | isolate:IFO0880

Project description:Rhodotorula toruloides IFO0880 4508 DirectFromRhodo2 resequencing

| PRJNA697996 | ENA

Rhodotorula toruloides strain:IFO0880 | isolate:IFO0880

Project description:Rhodotorula toruloides IFO0880 4508 DirectFromRhodo1 resequencing

| PRJNA697995 | ENA

Rhodotorula toruloides strain:IFO0880 | isolate:IFO0880

Project description:Rhodotorula toruloides IFO0880 Gene Expression Profiling - ABF_STC_SDMOCK1_WT_4A transcriptome

| PRJNA535593 | ENA

Rhodotorula toruloides strain:IFO0880 | isolate:IFO0880

Project description:Rhodotorula toruloides IFO0880 Gene Expression Profiling - ABF_STC_SDMOCK1_61_44_8A transcriptome

| PRJNA535612 | ENA

Rhodotorula toruloides strain:IFO0880 | isolate:IFO0880

Project description:Rhodotorula toruloides IFO0880 Gene Expression Profiling - ABF_STC_DMR5_WT_1A transcriptome

| PRJNA535581 | ENA

Rhodotorula toruloides strain:IFO0880 | isolate:IFO0880

Project description:Rhodotorula toruloides IFO0880 Gene Expression Profiling - ABF_STC_SDMOCK5_61_44_7D transcriptome

| PRJNA535588 | ENA

Rhodotorula toruloides strain:IFO0880 | isolate:IFO0880

Project description:Rhodotorula toruloides IFO0880 Gene Expression Profiling - ABF_STC_SDMOCK5_WT_3D transcriptome

| PRJNA535592 | ENA

Rhodotorula toruloides strain:IFO0880 | isolate:IFO0880

Project description:Rhodotorula toruloides IFO0880 Gene Expression Profiling - ABF_STC_DMR5_61_44_5B transcriptome

| PRJNA535598 | ENA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data