Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Paulownia

ABSTRACT: Paulownia tomentosa witches' broom seedlings miRNA sequencing

PROVIDER: PRJNA288855 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR2086500.fastq.gz	Fastqsanger.gz
	SRR2086501.fastq.gz	Fastqsanger.gz
	SRR2087933.fastq.gz	Fastqsanger.gz
	SRR2087934.fastq.gz	Fastqsanger.gz
	SRR2086498.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

Paulownia

Project description:Paulownia tomentosa witches' broom seedlings miRNA sequencing

| PRJNA288857 | ENA

Paulownia tomentosa

Project description:Paulownia tomentosa witches' broom seedlings miRNA sequencing

| PRJNA288854 | ENA

Phytoplasma induced changes in acetylatome and succinylatome provide evidence for involvement of acetylated proteins in Paulownia witches’ broom

Project description:Lysine acetylation and succinylation are post-translational modifications of proteins, and have been shown to play roles in plant response to pathogen infection. Phytoplasma infection can directly alter multiple metabolic processes in Paulownia and lead to Paulownia witches’ broom (PaWB), the major cause of Paulownia mortality worldwide. To explore the extent and function of lysine acylations during phytoplasma infection, we investigated global proteome, acetylome, and succinylome of phytoplasma-infected Paulownia tomentosa seedlings. In total, we globally yield 8963 proteins, 2893 acetylated, and 1271 succinylated proteins. Among them, 425 substrates were simultaneously acetylated and succinylated. Comparative analysis revealed that 276 proteins, 546 acetylated proteins and 5 succinylated proteins were associated with PaWB. Our results suggested that acetylation may be more important than succinylation in response to phytoplasma infection. Enzymatic assays showed that acetylation modified the activities of protochlorophyllide reductase and RuBisCO in phytoplasma-infected seedlings. On the basis of these results, a model to elucidate the molecular mechanism responses to PaWB was proposed and this research offer a resource for functional studies on the effects of acetylation on protein function.

2019-04-04 | PXD012701 | Pride

Paulownia witches'-broom phytoplasma

Project description:Paulownia witches'-broom phytoplasma overview

| PRJNA188034 | ENA

Paulownia witches'-broom phytoplasma

Project description:Paulownia witches'-broom phytoplasma Genome sequencing and assembly

| PRJNA624276 | ENA

Genome-wide identification and profiling of microRNAs in Paulownia tomentosa cambial tissues in response to seasonal changes

Project description:Analysis of Paulownia tomentosa cambial tissues at gene expression level. The hypothesis tested in the present study was that miRNAs can regulate the development of the vascular cambium.The results provide new insights into the important regulatory functions of miRNAs in vascular cambium development and wood formation in conifers.

2021-01-17 | GSE109323 | GEO

Paulownia

Project description:Paulownia tomentosa transcriptome

| PRJNA282559 | ENA

Paulownia

Project description:Paulownia tomentosa transcriptome

| PRJNA282560 | ENA

Paulownia tomentosa

Project description:Degradome sequencing of Paulownia tomentosa seedlings infected by witches'broom disease

| PRJNA289615 | ENA

Paulownia tomentosa

Project description:Paulownia tomentosa Genome sequencing