Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Insect gut metagenome

ABSTRACT: Bumble Bee Gut Reduced Representation Genomic Libraries Raw sequence reads

PROVIDER: PRJNA289884 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR2102240.fastq.gz	Fastqsanger.gz
	SRR2102250.fastq.gz	Fastqsanger.gz
	SRR2102254.fastq.gz	Fastqsanger.gz
	SRR2102255.fastq.gz	Fastqsanger.gz
	SRR2102236.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 9

Similar Datasets

insect gut metagenome

Project description:Bumble bee guts Metagenome

| PRJNA271896 | ENA

insect gut metagenome

Project description:Metagenome-assembled genomes of bumble bee gut microbiotas from commercial and wild populations

| PRJNA1076550 | ENA

insect gut metagenome

Project description:Corbiculate bee gut amplicons Raw sequence reads

| PRJNA309422 | ENA

MiRNAs in the genomes of Bombus terrestris and Bombus impatiens

Project description:Our aims in this study were: 1) to identify the miRNAs of the bumble bees Bombus terrestris and B. impatiens; 2) to compare the total numbers of miRNAs between both bumble bee species and between them and the honey bee, Apis mellifera; and 3) to test whether the sequences and expression patterns of miRNAs were conserved between species. To investigate each of these aims we used miRNA-seq (deep sequencing of miRNA-enriched libraries) in B. terrestris, and bioinformatics prediction programs to identify miRNAs in both Bombus species. We identified 131 miRNAs in B. terrestris, and 114 in B. impatiens; of these, 17 were new miRNAs that had not previously been sequenced in any species. We found a striking level of difference in the miRNAs present between Bombus and A. mellifera, with 103 miRNAs in A. mellifera not being present in the genomes of the two bumble bees.

2015-03-06 | GSE64512 | GEO

MiRNAs in the genomes of Bombus terrestris and Bombus impatiens

2015-03-06 | E-GEOD-64512 | biostudies-arrayexpress

insect gut metagenome

Project description:Honey bee gut metagenome

| PRJNA531038 | ENA

Theobroma cacao

Project description:Theobroma cacao reduced representation libraries

| PRJNA486150 | ENA

Evolution and molecular basis of caste differentiation in bees

Project description:Our aim was to identify the genes that are responsible for caste differentiation in the primitively eusocial bumble bee, Bombus terrestris. To do this we extracted RNA from both queen- and worker-destined larvae. We extracted RNA from three key stages during bumble bee development (before, during, and after their caste becomes fixed), and then sent the sequencing to the Earlham Institute. They used mRNAseq to isolate the RNA from each developmental stage and caste pathway.

2020-11-16 | GSE90751 | GEO

The effect of the brood and the queen on early gene expression in bumble bee workers' brains

Project description:We used RNA-se to compare gene expression patterns in workers of the bumble bee Bombus impatiens in response to the queen, the brood, both or none.

2022-02-13 | GSE196471 | GEO

insect gut metagenome

Project description:Honey bee gut microbial communities from New Haven, Connecticut, USA - Honey Bee colony

| PRJNA336870 | ENA