Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Thalassoma bifasciatum

ABSTRACT: Thalassoma bifasciatum Genome sequencing and assembly

PROVIDER: PRJNA293777 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR2223680_1.fastq.gz	Fastqsanger.gz
	SRR2223680_2.fastq.gz	Fastqsanger.gz
	SRR2223690_1.fastq.gz	Fastqsanger.gz
	SRR2223690_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 231

Similar Datasets

Thalassoma bifasciatum

Project description:Thalassoma bifasciatum overview

| PRJNA438715 | ENA

Thalassoma bifasciatum isolate:fThaBif1

Project description:Thalassoma bifasciatum (bluehead wrasse) genome, fThaBif1, haplotype 2

| PRJNA1132726 | ENA

Thalassoma bifasciatum isolate:fThaBif1

Project description:Thalassoma bifasciatum (bluehead wrasse) genome, fThaBif1, haplotype 1

| PRJNA1132727 | ENA

Project description:Thalassoma bifasciatum

| PRJEB97350 | ENA

Thalassoma lucasanum

Project description:Thalassoma lucasanum

| PRJNA1138259 | ENA

Thalassoma bifasciatum

Project description:Bluehead wrasse RNA-Seq data for alternative mating tactics

| PRJNA376835 | ENA

fThaBif2

Project description:Thalassoma bifasciatum, genomic assembly, fThaBif2

| PRJEB97352 | ENA

Project description:Thalassoma bifasciatum (bluehead wrasse) genome, fThaBif1

| PRJNA1144443 | ENA

Sexual phenotype differences in zic2 mRNA abundance in the preoptic area of a protogynous teleost, Thalassoma bifasciatum.

Project description:The highly conserved members of the zic family of zinc-finger transcription factors are primarily known for their roles in embryonic signaling pathways and regulation of cellular proliferation and differentiation. This study describes sexual phenotype differences in abundances of zic2 mRNA in the preoptic area of the hypothalamus, a region strongly implicated in sexual behavior and function, in an adult teleost, Thalassoma bifasciatum. The bluehead wrasse (Thalassoma bifasciatum) is a valuable model for studying neuroendocrine processes because it displays two discrete male phenotypes, initial phase (IP) males and territorial, terminal phase (TP) males, and undergoes socially-controlled protogynous sex change. Previously generated microarray-based comparisons suggested that zic2 was upregulated in the brains of terminal phase males relative to initial phase males. To further explore this difference, we cloned a 727 bp sequence for neural zic2 from field-collected animals. Riboprobe-based in situ hybridization was employed to localize zic2 signal in adult bluehead brains and assess the relative abundance of brain zic2 mRNA across sexual phenotypes. We found zic2 mRNA expression was extremely abundant in the granular cells of the cerebellum and widespread in other brain regions including in the thalamus, hypothalamus, habenula, torus semicircularis, torus longitudinalis, medial longitudinal fascicle and telencephalic areas. Quantitative autoradiography and phosphorimaging showed zic2 mRNA hybridization signal in the preoptic area of the hypothalamus was significantly higher in terminal phase males relative to both initial phase males and females, and silver grain analysis confirmed this relationship between phenotypes. No significant difference in abundance was found in zic2 signal across phenotypes in the habenula, a brain region not implicated in the control of sexual behavior, or cerebellum.

| S-EPMC3149650 | biostudies-literature

fThaBif2

Project description:Thalassoma bifasciatum, genomic and transcriptomic data

| PRJEB97351 | ENA