Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Hydrothermal vent metagenome

ABSTRACT: The Structure of Bacterial Communities and Its Chemoautotrophic Players in Sulfur-rich Sediments of Shallow Water HTVs off Kueishan Island, Taiwan

PROVIDER: PRJNA305844 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR3712120.fastq.gz	Fastqsanger.gz
	SRR3714280.fastq.gz	Fastqsanger.gz
	SRR3711651.fastq.gz	Fastqsanger.gz
	SRR3712121.fastq.gz	Fastqsanger.gz
	SRR3714241.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 21

Similar Datasets

Sulfur-rich sediments collected from shallow-water hydrothermal vent of Kueishan Island (Taiwan)

Project description:Sulfur-rich sediments collected from shallow-water hydrothermal vent of Kueishan Island (Taiwan) Assembly

| PRJNA855887 | ENA

Sulfur-rich sediments collected from shallow-water hydrothermal vent of Kueishan Island (Taiwan)

Project description:Sulfur-rich sediments collected from shallow-water hydrothermal vent of Kueishan Island (Taiwan) Assembly

| PRJNA853916 | ENA

Sulfur-rich sediments collected from shallow-water hydrothermal vent of Kueishan Island (Taiwan)

Project description:Sulfur-rich sediments collected from shallow-water hydrothermal vent of Kueishan Island (Taiwan) Raw sequence reads

| PRJNA851985 | ENA

Sulfur-rich sediments collected from shallow-water hydrothermal vent of Kueishan Island (Taiwan)

Project description:Sulfur-rich sediments collected from shallow-water hydrothermal vent of Kueishan Island (Taiwan) metagenomic Raw sequence reads

| PRJNA847634 | ENA

hydrothermal vent metagenome

Project description:Microbial diversity in shallow water hydrothermal sediments of Gueishan Island, Taiwan

| PRJNA192445 | ENA

Project description:Sulfur-rich sediments collected from shallow-water hydrothermal vent of Kueishan Island (Taiwan) Functional gene Raw sequence reads

| PRJNA865520 | ENA

Co-expression analysis reveals distinct alliances around two carbon fixation pathways in hydrothermal vent symbionts

Project description:Biological carbon fixation is foundational to the biosphere. Most autotrophs are thought to possess one carbon fixation pathway. The hydrothermal vent tubeworm Riftia pachyptila’s chemoautotrophic symbionts, however, possess two functional pathways: the Calvin Benson-Bassham (CBB) and the reductive tricarboxylic acid (rTCA) cycles. Little is known about how Riftia’s symbionts and related organisms coordinate the functioning of these two pathways. Here we investigated net carbon fixation rates, transcriptional/metabolic responses, and transcriptional co-expression patterns of Riftia pachyptila’s endosymbionts by incubating tubeworms at environmental pressures, temperature, and geochemistry. Results showed that rTCA and CBB transcriptional patterns varied in response to different geochemical regimes and that each pathway is allied to specific metabolic processes, suggesting distinctive yet complementary roles in metabolic function. Net carbon fixation rates were also exemplary, and accordingly we propose that co-activity of CBB and rTCA may be an adaptation for maintaining high carbon fixation rates, conferring a fitness advantage in dynamic vent environments.

2024-03-28 | GSE249345 | GEO

hydrothermal vent metagenome

Project description:Shallow-vent metagenome

| PRJNA386676 | ENA

hydrothermal vent metagenome

Project description:Shallow-sea Hydrothermal Systems Metagenome

| PRJNA178514 | ENA

hydrothermal vent metagenome

Project description:Shallow-sea Hydrothermal Vents Targeted Locus (Loci)

| PRJNA157211 | ENA