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Schizophyllum commune

ABSTRACT: Smelling the difference: Transcriptome, proteome and volatilome changes after mating

PROVIDER: PRJNA328103 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR3747710.fastq.gz	Fastqsanger.gz
	SRR3747711.fastq.gz	Fastqsanger.gz
	SRR3747712.fastq.gz	Fastqsanger.gz
	SRR3747707.fastq.gz	Fastqsanger.gz
	SRR3747708.fastq.gz	Fastqsanger.gz

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Similar Datasets

Smelling the difference: Transcriptome, proteome and volatilome changes after mating

Project description:Mushrooms, such as Schizophyllum commune, have a specific odor. Whether this is linked to mating, prerequisite for mushroom formation, or also found in monokaryotic, unmated strains, was investigated with a comprehensive study on the transcriptome and proteome of this model organism. Mating interactions were investigated using a complete, cytosolic proteome map for unmated, monokaryotic, as well as for mated, dikaryotic mycelia. The regulations of the proteome were compared to transcriptional changes upon mating and to changes in smell by volatilome studies. We could show a good overlap between proteome and transcriptome data, but extensive posttranslational regulation was identified for more than 80 % of transcripts. This suggests down-stream regulation upon interaction of mating partners and formation of the dikaryon that is competent to form fruiting bodies. The volatilome was shown to respond to mating by a broader spectrum of volatiles and increased emission of the mushroom smell molecules 3-octanone and 1-octen-3-ol, as well as ethanol and ß-bisabolol in the dikaryon. Putatively involved biosynthetic proteins like alcohol dehydrogenases, Ppo-like oxygenases, or sesquiterpene synthases showed correlating transcriptional regulation depending on either mono- or dikaryotic stages.

2017-07-07 | GSE84124 | GEO

Study of mating type genes and their roles in mating interactions of the basidiomycete Schizophyllum commune

2012-06-15 | GSE26401 | GEO

Schizophyllum commune

Project description:Study of mating type genes and their roles in mating interactions of the basidiomycete Schizophyllum commune

| PRJNA136853 | ENA

Schizophyllum commune

Project description: Not available

| S-EPMC8888233 | biostudies-literature

Study of mating type genes and their roles in mating interactions of the basidiomycete Schizophyllum commune

Project description:Transcriptome changes associated with mating interactions were performed in order to identify signaling components and targets of pheromone response. Two monokaryons (S. commune 12-43 and 4-39), a dikaryon (W22 x 12-43), both semi-compatible mating interactions (Aon: W22 x 4-39; Bon, flat: W21 x 4-39), and different S. commune pheromone receptor recipient strains (Vbar2f, Vbar2t) were analyzed for that purpose. In addition, a S. commune strain showing the thin-phenotype (W22-thin) was investigated to figure out the role of Thn1 in mating. With microarray analysis mRNA expression in different mating interactions of the basidiomycete S. commune was analyzed. Genes which show regulation in the comparison of the two monokaryons 12-43 and 4-39 has been eliminated from other comparisons as strain specific differences. Two biological or technical replicate samples were analyzed for each condition.

2012-06-14 | E-GEOD-26401 | biostudies-arrayexpress

Study of heavy metal stress in the basidiomycete Schizophyllum commune

Project description:Transcriptome changes associated with metal stress were investigated in order to identify tolerance mechanisms and the impact on inositol signaling. The wild type S. commune 12-43 was compared with 12-43 grown with addition of contaminated seepage water (HSW) and another wild type strain W22 grown with 0.01 mM Cd.

2021-04-20 | GSE172373 | GEO

Fungemia associated with Schizophyllum commune in Brazil.

Project description: Not available

| S-EPMC5490937 | biostudies-literature

Allergic fungal sinusitis caused by Schizophyllum commune.

Project description:A case of allergic fungal sinusitis (AFS) due to Schizophyllum commune was reported. The pathogen was identified using molecular bioanalysis. The patient underwent the functional endoscopic sinus surgery followed by the radical maxillary sinusotomy with canine fossa trephine. This case suggested that complete surgery allowed optimal disease clearance for AFS caused by Schizophyllum commune.

| S-EPMC5683597 | biostudies-literature

First report on Schizophyllum commune from a dog.

Project description:This report describes the first isolation of Schizophyllum commune from a granulomatous lesion on the neck of a dog. The biopsy specimen from the lesion disclosed granulomatous inflammation with branching fungal hyphae without clamp connections. The clinical isolate was identified as S. commune by mycological examination and analysis of ribosomal DNA sequences.

| S-EPMC130828 | biostudies-literature

Inositol Signaling in the Basidiomycete Fungus Schizophyllum commune.

Project description:Intracellular signaling is conserved in eukaryotes to allow for response to extracellular signals and to regulate development and cellular functions. In fungi, inositol phosphate signaling has been shown to be involved in growth, sexual reproduction, and metabolic adaptation. However, reports on mushroom-forming fungi are lacking so far. In Schizophyllum commune, an inositol monophosphatase has been found up-regulated during sexual development. The enzyme is crucial for inositol cycling, where it catalyzes the last step of inositol phosphate metabolism, restoring the inositol pool from the monophosphorylated inositol monophosphate. We overexpressed the gene in this model basidiomycete and verified its involvement in cell wall integrity and intracellular trafficking. Strong phenotypes in mushroom formation and cell metabolism were evidenced by proteome analyses. In addition, altered inositol signaling was shown to be involved in tolerance towards cesium and zinc, and increased metal tolerance towards cadmium, associated with induced expression of kinases and repression of phosphatases within the inositol cycle. The presence of the heavy metals Sr, Cs, Cd, and Zn lowered intracellular calcium levels. We could develop a model integrating inositol signaling in the known signal transduction pathways governed by Ras, G-protein coupled receptors, and cAMP, and elucidate their different roles in development.

| S-EPMC8230515 | biostudies-literature

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