Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Perilla frutescens glandular trichome RNAseq

PROVIDER: PRJNA341395 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR4106088_1.fastq.gz	Fastqsanger.gz
	SRR4106088_2.fastq.gz	Fastqsanger.gz
	SRR4106089_1.fastq.gz	Fastqsanger.gz
	SRR4106089_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 4 of 4

Similar Datasets

Different gene expression in the tomato trichome and leaf

Project description:We report the transcriptome difference between glandular cells of type VI trichome and leaf cells of trichome shaved leaf.

2021-07-26 | GSE117766 | GEO

Perilla frutescens

Project description:Perilla frutescens Assembly

| PRJNA339041 | ENA

Perilla frutescens var. frutescens cultivar:Perilla frutescens M40

Project description:Perilla frutescens var. frutescens cultivar:Perilla frutescens M40 Transcriptome or Gene expression

| PRJNA391546 | ENA

Perilla frutescens var. frutescens cultivar:Perilla frutescens M40

Project description:Perilla frutescens var. frutescens cultivar:Perilla frutescens M40 Transcriptome or Gene expression

| PRJNA391547 | ENA

Gene expression in the tomato trichome collected from af mutant and its complemented lines

Project description:We report the effect of chalcone isomerase deficiency on gene expression of glandular cells of type VI trichome in tomato leaves.

2021-07-27 | GSE118065 | GEO

Transcriptome profiling reveals roles of meristem regulators and polarity genes during multicellular fruit trichome development in cucumber (Cucumis sativus L.).

Project description:Trichomes are the hair-like structures that are widely present on the surface of aerial organs and function in plant defense against biotic and abiotic stresses. Previous studies focus on the single cell trichomes in Arabidopsis and cotton, or multicellular glandular trichomes in tomato, but the developmental process and molecular mechanisms controlling multicellular non-glandular trichome development are largely neglected. Here, we extensively characterized the fruit trichome (spine) development in wild type cucumber and in a tiny branched hair (tbh) mutant that contains a spontaneous mutation and has hairless foliage and smooth fruit surface. Our data indicated that cucumber trichome was multicellular and non-glandular, with no branches or endoreduplication. Further, the major feature of cucumber trichome development was spine base expansion. Transcriptome profiling through Digital Gene Expression indicated that meristem-related genes and transcription factors were implicated in the fruit spine development, and polarity regulators were upregulated during spine base expansion. qRT-PCR verified the reliability of our RNA-SEQ data, and in situ hybridization confirmed the enriched expression of meristem regulators CUP-SHAPED COTYLEDON3 (CUC3) and STM (SHOOT MERISTEMLESS) , as well as the abaxial identity gene KANADI (KAN) in cucumber fruit spine. Together, our results suggest a distinct regulatory pathway involving meristem genes and polarity regulators in multicellular trichome development in cucumber.

2014-07-01 | GSE49607 | GEO

Perilla frutescens

Project description:Perilla frutescens Genome sequencing

| PRJNA716796 | ENA

Project description:MHPP-treated Perilla frutescens

| PRJNA594862 | ENA

Perilla frutescens

Project description:Perilla frutescens Raw reads

| PRJNA384923 | ENA

Perilla frutescens

Project description:Perilla frutescens Raw reads

| PRJNA384929 | ENA