Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Soil metagenome cultivar:MAPs

ABSTRACT: Study of microbial (fungal) community of soil of CSIR-CIMAP, Lucknow, maintained under organic vs. conventional farming

PROVIDER: PRJNA343404 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR4254628_1.fastq.gz	Fastqsanger.gz
	SRR4254628_2.fastq.gz	Fastqsanger.gz
	SRR4254629_1.fastq.gz	Fastqsanger.gz
	SRR4254629_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 4 of 4

Similar Datasets

soil metagenome cultivar:MAPs

Project description:Study of microbial (bacterial) community of soil of CSIR-CIMAP, Lucknow, maintained under organic vs. conventional farming

| PRJNA343403 | ENA

soil metagenome cultivar:Patchouli “Johore”

Project description:Study of fungal microbial community of Pogostemon cablin Benth. under organic vs. conventional farming

| PRJNA343401 | ENA

soil metagenome cultivar:Patchouli “Johore”

Project description:Study of microbial (bacterial) community of Pogostemon cablin Benth. under organic vs. conventional farming

| PRJNA343399 | ENA

Project description:Study on the changes in microbial community structure and function in organic farming vs. conventional farming

| PRJNA856127 | ENA

Comprehensive characterization of raw and processed quinoa from conventional and organic farming by label-free shotgun proteomics

Project description:Quinoa is widely recognized for its exceptional nutritional properties, particularly its complete protein content. This study, for the first time, investigates the effects of processing methods (boiling and extrusion) and farming conditions (conventional and organic) on the quinoa’s proteomic profile. Following a label-free shotgun proteomics approach, a total of 1,796 proteins were identified and quantified across all quinoa samples. Regarding processing, both boiling and extrusion produced protein extracts with lower total protein content, with the number of identified proteins decreasing from 1,695 in raw quinoa to 957 in processed quinoa. Boiling led to a reduction in protein diversity and expression, while extrusion, which involves high temperatures and pressures, specifically decreased the abundance of high molecular mass proteins. Concerning cultivation practices, organic farming was associated with a broader protein diversity, especially proteins related to translation (28% vs. 5%), while conventional farming showed a higher abundance of catalytic and enzymatic proteins (67% vs. 46%). These findings highlight the distinct proteomic changes induced by different processing methods and farming conditions, offering valuable insights to manage quinoa’s nutritional, bioactive, and functional properties across various production practices.

2025-01-17 | PXD050043 | Pride

Differences in fungal and bacterial soil communities associated with common bean crops under organic vs. conventional farming system

Project description:Soil metabarcoding in conventional vs. organic farming practices

| PRJEB80709 | ENA

Microservices_DOK_SP

Project description:Microbial resistance and resilience to drought under organic and conventional farming

| PRJEB73799 | ENA

Project description:Soil microbiome from organic and conventional farming

| PRJNA1344597 | ENA

Project description:Difference in seed endophytic microbiome between conventional and organic farming

| PRJNA866104 | ENA

Project description:Difference in seed endophytic microbiome between conventional and organic farming