Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Marinobacter nauticus

ABSTRACT: Hydrocarbon-degrading marine bacterium

PROVIDER: PRJNA35447 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR10424827_1.fastq.gz	Fastqsanger.gz
	SRR10424827_2.fastq.gz	Fastqsanger.gz
	SRR18291412.fastq.gz	Fastqsanger.gz
	SRR18291413.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 601

Similar Datasets

Marinobacter nauticus VT8

Project description:Moderately halophilic hydrocarbon-degrading bacterium

| PRJNA13239 | ENA

Comparative proteomics of Marinobacter sp. TT1 reveals Corexit impacts on hydrocarbon metabolism, chemotactic motility and biofilm formation

Project description:The application of chemical dispersants during marine oil spills can affect the community composition and activity of native marine microorganisms. Several studies have indicated that certain marine hydrocarbon-degrading bacteria, such as Marinobacter spp., can be inhibited by chemical dispersants, resulting in lower abundances and/or reduced hydrocarbon-biodegradation rates. In this respect, a major knowledge gap exists in understanding the mechanisms underlying these observed physiological effects. Here, we performed comparative proteomics of the Deepwater Horizon isolate Marinobacter sp. TT1 grown under different conditions that varied regarding the supplied carbon sources (pyruvate vs. n-hexadecane) and whether or not dispersant (Corexit EC9500A) was added, or that contained crude oil in the form of a water-accommodated fraction (WAF) or chemically-enhanced WAF (CEWAF). We characterized the proteins associated with alkane metabolism and alginate biosynthesis in strain TT1, report on its potential for aromatic hydrocarbon biodegradation and present a proposed metabolism of Corexit components as carbon substrates for the strain. Our findings implicate Corexit in affecting hydrocarbon metabolism, chemotactic motility, biofilm formation, and inducing solvent tolerance mechanisms like efflux pumps in strain TT1. This study provides novel insights into dispersant impacts on microbial hydrocarbon degraders that should be taken into consideration for future oil spill response actions.

2020-12-22 | PXD021108 | Pride

Marinobacter nauticus

Project description:Marinobacter nauticus Genome sequencing and assembly

| PRJNA1226101 | ENA

Aromatoleum aromaticum

Project description:Aromatic hydrocarbon-degrading bacterium

| PRJNA35451 | ENA

Novosphingobium aromaticivorans

Project description:Aromatic hydrocarbon-degrading bacterium

| PRJNA35127 | ENA

Marinobacter adhaerens

Project description:Marine bacterium