Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Boechera stricta cultivar:RP420

ABSTRACT: Boechera stricta RP420 genome sequencing

PROVIDER: PRJNA367850 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR6823148_1.fastq.gz	Fastqsanger.gz
	SRR6823148_2.fastq.gz	Fastqsanger.gz
	SRR6823149_1.fastq.gz	Fastqsanger.gz
	SRR6823149_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 4 of 4

Similar Datasets

Expression analysis of uninfected Boechera stricta and infected Boechera stricta with Puccinia monoica forming pseudoflowers using an Arabidopsis thaliana gene expression 4x72K array design from NimbleGen.

2013-09-01 | GSE41165 | GEO

Project description:The expression of 30362 plant genes from uninfected flowers of Boechera stricta, uninfected steam and leaves of B. stricta and infected B. stricta with Puccinia monoica forming pseudoflowers. We hybridized cDNA from each sample to an Arabidopsis thaliana gene expression 4x72K format NimbleGen array (ATH6_60mer_expr). We used a eukaryotic gene expression array design No.5048 from NimbleGen (Cat No. A4511001-00-01). Each 5048 array measures the expression level of 30,362 target genes from Arabidopsis thaliana in a 4-plex format 4x72K with with 72,000 probes per array, a total of two probes per target gene, and 60-mer probe length. Total RNA samples recovered from infected leaves of Boechera stricta with Puccinia monoica (pseudoflowers) and uninfected stem and leaves of B. stricta. Experiments included three/two biological repllicates from each sample. We carried out total RNA extractions for all samples using RNAesy Plant Mini Kit (Qiagen, Cat No. 74904). cDNA synthesis was performed by NimbleGen.

2013-09-01 | E-GEOD-41165 | biostudies-arrayexpress

Boechera stricta cultivar:RP270

Project description:Boechera stricta RP270 Boechera stricta Reference Population Plate 6 genome sequencing

| PRJNA370641 | ENA

Boechera stricta cultivar:RP390

Project description:Boechera stricta RP390 genome sequencing

| PRJNA367845 | ENA

Boechera stricta cultivar:RP445

Project description:Boechera stricta RP445 genome sequencing

| PRJNA367865 | ENA

Boechera stricta cultivar:RP480

Project description:Boechera stricta RP480 genome sequencing