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Populus tomentosa

ABSTRACT: Identification and analysis of microRNAs in the SAM and leaves of Populus tomentosa

PROVIDER: PRJNA391247 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR8312210.fastq.gz	Fastqsanger.gz
	SRR8312207.fastq.gz	Fastqsanger.gz
	SRR8312208.fastq.gz	Fastqsanger.gz
	SRR8312209.fastq.gz	Fastqsanger.gz

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Transcriptomic and metabolomic analysis of the heat-stress response of Populus tomentosa

Project description:We sequenced mRNA from the control and heat treatments leaves of Populus tomentosa using the Illumina HiSeq4000 platform to generate the transcriptome dynamics that may serve as a gene expression profile blueprint for different response patterns under control and heat stress in Populus tomentosa.

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Identification and analysis of microRNAs in the SAM and leaves of Populus tomentosa

Project description:High-throughput sequencing was performed to build four sRNA libraries (each sample with two replications) derived from shoot tips and mature leaf tissues of P. tomentosa. Millions of small RNA (sRNA) reads were obtained, and many known and novel miRNAs in SAM and leaf libraries were established. Several miRNAs that were differentially expressed between the SAM and its surrounding tissues, and their targets involved in important biological processes were identified and analyzed. Our study provide insights for better understanding the regulatory mechanisms of miRNAs involved in the SAM of woody plants.

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Expression data from two year old shoot apex and mature xylem of Populus tomentosa

Project description:We take the two year old plant for sampling.Use the Affymetrix poplar gene chip to elucidate the gene functions and mechanisms in Populus tomentosa shoot apex and mature xylem. We used microarrays to detail the global programme of gene expression in shoot apex and mature xylem. Populus tomentosa shoot apex and mature xylem were taken for RNA extraction and hybridization on Affymetrix microarrays.CB2009304-C and CB2009304-D from shoot apex, CB2009304-G and CB2009304-H from mature xylem.

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