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Danio rerio

ABSTRACT: Sequencing of Danio rerio brain from wildtype and Tg-microRNA-sponge animals

PROVIDER: PRJNA400241 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR5979260.fastq.gz	Fastqsanger.gz
	SRR5979251.fastq.gz	Fastqsanger.gz
	SRR5979261.fastq.gz	Fastqsanger.gz
	SRR5979252.fastq.gz	Fastqsanger.gz
	SRR5979262.fastq.gz	Fastqsanger.gz

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Sequencing of Danio rerio brain from wildtype and Tg-microRNA-sponge animals

Project description:Comparison of gene expression profiles from Danio rerio brain of wiltype and Tg-microRNA-sponge animals. The RNA-seq data comprise 3 groups. Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)

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Sequencing of Danio rerio brain from tert mutants and controls

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Sequencing of Danio rerio brain for 2 age groups after physical exercise

Project description:Comparison of gene expression profiles from Danio rerio brain for 2 age groups. The RNA-seq data comprise 2 x 2 groups: two age groups, each with and without physical exercise (swim-tunnel). Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)

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Expression analysis of Danio rerio semaphorin6a and plexinA2 morpholino-injected embryos

Project description:Investigation of whole genome gene expression level changes in Danio rerio semaphorin6A and plexinA2 morphant animals, compared to the wild-type strain. The morphants analyzed in this study are further described in Ebert AM, Childs SJ, Hehr C, Cechmanek PB, McFarlane S. 2014. Sema6a and Plxna2 mediate spatially regulated repulsion within the developing eye to promote eye vesicle cohesion. Development 141(12):2473-2482.

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Danio rerio cultivar:Danio rerio

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Transcriptional responses of the zebrafish (Danio rerio) brain to acute sodium selenite supplementation.

Project description:The possible benefits of selenium (Se) supplementation are currently under investigation for prevention of certain cancers and treatment of neurological disorders. Little is known concerning the response of the brain to increased dietary Se under conditions of Se sufficiency, despite the majority of Se supplementation trials occurring in healthy subjects considered Se sufficient. We evaluated the transcriptional response of the zebrafish (Danio rerio) brain to supplementation with nutritionally relevant levels of dietary Se (sodium selenite) during conditions of assumed Se sufficiency. We used a microarray approach to analyze the global gene expression response of the brain to dietary Se supplementation for 14 days. The experiment used Affymetrix microarrays to compare whole brain RNA from 8 adult zebrafish (Danio rerio) fed a diet with control selenium levels (1.4ppmSe) and 8 fed a diet supplemented with sodium selenite (5.6ppmSe) for 14 days, and with an equal sex ratio within each diet.

2013-02-26 | E-GEOD-44623 | biostudies-arrayexpress

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