Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNA-Seq on wild type and Linear Minichromosome strains arrested in metaphase

ABSTRACT: RNA-Seq on wild type and Linear Minichromosome strains arrested in metaphase

PROVIDER: PRJNA411784 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR6059520.fastq.gz	Fastqsanger.gz
	SRR6059524.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

ChIP-Seq for wild type strains arrested in metaphase with and without tension

Project description:ChIP-Seq for wild type strains arrested in metaphase with and without tension

| PRJNA408170 | ENA

Calibrated Sgo1 and Brn1 ChIP-seq for wild type strains arrested in metaphase without tension

Project description:Calibrated Sgo1 and Brn1 ChIP-seq for wild type strains arrested in metaphase without tension

| PRJNA526856 | ENA

Calibrated Scc1 ChIP-seq for wild type and chl4Δ strains arrested in metaphase with and without tension

Project description:Calibrated Scc1 ChIP-seq for wild type and chl4Δ strains arrested in metaphase with and without tension

| PRJNA526859 | ENA

Calibrated Scc1 ChIP-seq for wild type and rad61Δ strains arrested in metaphase with and without tension

Project description:Calibrated Scc1 ChIP-seq for wild type and rad61Δ strains arrested in metaphase with and without tension

| PRJNA526840 | ENA

RNA-Seq on wild type and Linear Minichromosome strains arrested in metaphase

Project description:Purpose: Are convergent genes at boundaries expressed?

2020-01-13 | GSE104134 | GEO

Sgo1 ChIP-seq for wild type cells arrested in metaphase with and without tension

Project description:Sgo1 ChIP-seq for wild type cells arrested in metaphase with and without tension

| PRJNA407933 | ENA

Genome-wide binding of the meiosis specific Rec8 cohesin subunit in metaphase I

Project description:ChIP-seq profile of Rec8 binding sites arrested in metaphase I by depletion of the APC/C activator CDC20. The aim of this experiment is to identify Rec8 binding sites in metaphase I.

2019-04-25 | GSE123546 | GEO

hnRNPC engages mature RNAs during metaphase: RNA-seq and fCLIP in proTAME-arrested HeLa/HeLa S3 cells

Project description:Proper progression through mitosis requires coordinated changes in RNA metabolism, but the specific contributions of individual RNA-binding proteins remain unclear. Heterogeneous nuclear ribonucleoprotein C (hnRNPC) is a ubiquitous RBP that normally binds uridine-rich sequences to influence pre-mRNA processing and stability. Here we investigated the role of hnRNPC in mitotic cells by profiling both global RNA abundance and hnRNPC–RNA interactions during metaphase arrest. To this end, we combined bulk RNA-seq with fluorescent crosslinking and immunoprecipitation (fCLIP) in proTAME-arrested HeLa S3 cells. This dataset enables the characterization of hnRNPC binding to mature RNAs during mitosis, the evaluation of biochemical fractionation (low-density vs high-density complexes), and the assessment of binding site resolution across distinct RNase digestion conditions. Together, the study provides a resource for exploring how hnRNPC contributes to RNA stability and gene expression control during cell division

2026-04-12 | GSE307226 | GEO

Chromosome conformation for wild type and clb5 clb6 strains arrested in meiotic prophase I

Project description:High-resolution Hi-C in meiotic prophase arrested cells

2022-02-04 | GSE185016 | GEO

ChIP-Seq for wild type strains arrested in metaphase with and without tension

Project description:Purpose: The goal is to determine the requirement for Chl4 in association of cohesin with the centromere and pericentromere boundaries

2020-01-13 | GSE104081 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data