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Atlantic salmon gut metagenome

ABSTRACT: Intestinal microbiota of Atlantic salmon freshwater parr and seawater post-smolts

PROVIDER: PRJNA412587 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR6123220.fastq.gz	Fastqsanger.gz
	SRR6123230.fastq.gz	Fastqsanger.gz
	SRR6123240.fastq.gz	Fastqsanger.gz
	SRR6123211.fastq.gz	Fastqsanger.gz
	SRR6123221.fastq.gz	Fastqsanger.gz

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Transcriptional response of Atlantic salmon (Salmo salar) to fish oil vs vegetable oil based diets

Project description:The effect of different diets (i.e. fish oil based vs vegetable oil based) on liver transcription profiles over the life history stages (freshwater and marine phases) of cultured Atlantic salmon (Salmo salar) were explored. Two groups of fish were raised from first feeding on different lipid containing diets; a) the standard 100% fish oil based diet, the other enriched with a blend of vegetable oils (75%) + fish oil (25%). Liver samples were taken from fish at four time points: two freshwater phase (as parr 36 weeks post hatch (wph); as pre-smolts, 52 wph) and two marine phase ( as post-smolts 55 wph; and as adult fish , 86 wph). A total of 96 cDNA microarray hybridisations - TRAITS / SGP Atlantic salmon 17k feature cDNA microarray - were performed ( 2 diets x 4 time points x 6 biological replicates x 2 -dye swap) using a comon pooled reference contol design.

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Gene expression in liver, gill, hypothalamus, pituitary, and olfactory rosettes from Atlantic salmon parr and smolt

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