Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Marine metagenome

ABSTRACT: Active picoeukaryotes in the Eastern Mediterranean Sea

PROVIDER: PRJNA414354 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR6175461.fastq.gz	Fastqsanger.gz
	SRR6175462.fastq.gz	Fastqsanger.gz
	SRR6175463.fastq.gz	Fastqsanger.gz
	SRR6175465.fastq.gz	Fastqsanger.gz
	SRR6175475.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

marine sediment metagenome

Project description:Eastern Mediterranean Deep Sea Sediment Targeted Locus (Loci)

| PRJNA192931 | ENA

marine sediment metagenome

Project description:Microbial communities in deep eastern Mediterranean Sea surface sediments

| PRJNA270910 | ENA

marine metagenome

Project description:Deep sea 2200m Eastern Mediterranean water column Transcriptome or Gene expression

| PRJNA240895 | ENA

marine metagenome

Project description:Mediterranean Sea Metagenomics

| PRJNA305355 | ENA

marine picoeukaryote environmental sample

Project description:sea water picoeukaryotes Metagenome

| PRJNA413617 | ENA

Metaproteomics to study metabolic handoffs in the Idas modiolaeformis symbiosis

Project description:The goal of this study was to identify the key functions of the six main symbionts that are hosted in gills of the marine bivalve, Idas modiolaeformis, which lives at deep-sea hydrocarbon seeps and wood falls in the Eastern Atlantic Ocean and the Mediterranean Sea. These symbionts include the main autotrophic methane- and sulfur-oxidizing lineages (Methyloprofundus, Thioglobus, Thiodubillierella), as well as a Methylophagaceae methylotrophic autotroph, a flavobacterial degrader of complex polysaccharides Urechidicola and a Nitrincolaceae heterotroph that specializes in degradation of nitrogen-rich compounds such as peptides and nucleosides. Four I. modiolaeformis individuals were preserved in RNAlater following retrieval from a brine pool habitat in the Eastern Mediterranean at 1,150 m water depth (32° 13.4' N 34° 10.7' E), using a remotely-operated vehicle. RNAlater was discarded after 24 hours, and the specimens were kept at -80°C until DNA/RNA/protein co-extraction using the AllPrep DNA/RNA/Protein Mini Kit (Cat. No. 80004, Qiagen).

2023-07-20 | PXD040273 | Pride

marine metagenome

Project description:Mediterranean Sea Environmental Sampling Metagenome

| PRJNA29029 | ENA

marine metagenome

Project description:Southwest Mediterranean Sea uncultured phage metagenome

| PRJNA47427 | ENA

marine metagenome

Project description:particle-associated bacteria from the Mediterranean Sea

| PRJNA318731 | ENA

marine plankton metagenome

Project description:Phytoplankton communities in the shallow eastern Mediterranean coastal waters