Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Phtheirospermum japonicum

ABSTRACT: Phtheirospermum japonicum and Oryza sativa, RNA-seq data

PROVIDER: PRJNA437192 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR6816610.fastq.gz	Fastqsanger.gz
	SRR6816620.fastq.gz	Fastqsanger.gz
	SRR6816630.fastq.gz	Fastqsanger.gz
	SRR6816640.fastq.gz	Fastqsanger.gz
	SRR6816650.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 60

Similar Datasets

Root transcriptome of the facultative parasitic plant Phtheirospermum japonicum

Project description:47,984 unigenes with putative coding regions with at least 50 amino acids were selected from whole transcriptome (SAMN03271814) of Phtheirospermum japonicum Microarray slides were hybridized with labeled cRNA from roots of 2-week-old Phtheirospermum japonicum plants growing axenically and treated with haustoria-inducer DMBQ (10 µM) for 0, 0.5, 1, 3, 6, 12, 24 and 48 h

2015-05-31 | GSE65723 | GEO

Phtheirospermum japonicum

Project description:Phtheirospermum japonicum overview

| PRJNA383756 | ENA

Nitrates increase abscisic acid levels to regulate haustoria formation in the parasitic plant Phtheirospermum japonicum

Project description:Transcriptomic changes during haustoria formation in the parasitic plant Phtheirospermum japonicum. We performed RNAseq on Phtheirospermum japonicum seedling infecting and not infecting over 5 time points during haustoria formation for the control treatment and over 3 time points for the ammonium nitrate and 6-Benzylaminipurine. We investigated the transcriptomic changes during haustoria formation and how this is affected in the transcritpome level by nitrate and cytokinin treatment.

2022-05-17 | GSE177484 | GEO

Phtheirospermum japonicum strain:Okayama

Project description:Phtheirospermum japonicum RNAseq

| PRJDB10085 | ENA

Phtheirospermum japonicum

Project description:Root transcriptome of the facultative parasitic plant Phtheirospermum japonicum

| PRJNA274795 | ENA

Phtheirospermum japonicum cultivar:Okayama

Project description:Transcriptome of facultative parasitic plant Phtheirospermum japonicum

| PRJNA604993 | ENA

Phtheirospermum japonicum strain:Okayama

Project description:Whole genome sequence of Phtheirospermum japonicum ethylene related mutants

| PRJDB10374 | ENA

Phtheirospermum japonicum strain:OKAYAMA

Project description:Phtheirospermum genome sequence

| PRJDB3858 | ENA

Phtheirospermum japonicum

Project description:Integration of single nucleus RNA-seq and bulk RNA-seq reveals gene regulatory networks for vascular connection between parasitic plants and host plants

| PRJDB19215 | ENA

A long-distance inhibitory system regulates haustoria numbers in parasitic plants

Project description:Transcriptomic response changes following infection in shoots of the parasitic plant Phtheirospermum japonicum. We performed RNAseq on shoots of Phtheirospermum japonicum infecting and not infecting at 10 days after addition of the host Arabidopsis thaliana. We investigated the systemic transcriptomic changes in the shoot following the establishment of haustoria in the roots of P.japonicum.

2025-01-26 | GSE253722 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data