Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Zea mays strain:Zheng58, Mo17, 5003, 478, 178, and Chang7-2

ABSTRACT: Zea mays strain:Zheng58, Mo17, 5003, 478, 178, and Chang7-2 Genome sequencing

PROVIDER: PRJNA43759 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR030540.fastq.gz	Fastqsanger.gz
	SRR030541_1.fastq.gz	Fastqsanger.gz
	SRR030541_2.fastq.gz	Fastqsanger.gz
	SRR030542.fastq.gz	Fastqsanger.gz
	SRR030543.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 64

Similar Datasets

Degradome sequencing were performed on maize inbred lines Chang7-2 (resistant to SCMV) and Mo17 (susceptible to SCMV).

Project description:The maize inbred lines Chang7-2 (resistant to SCMV) and Mo17 (susceptible to SCMV) were inoculated with SCMV (SC, SM) and phosphate buffer (MC, MM), respectively to subjected to degradome sequencing.

2024-08-01 | GSE234274 | GEO

Whole-transcriptome RNA sequencing and degradome sequencing were performed on maize inbred lines Chang7-2 (resistant to SCMV) and Mo17 (susceptible to SCMV).

2024-08-01 | GSE233952 | GEO

Panicum virgatum cultivar:5003

Project description:Panicum virgatum exome capture - 5003

| PRJNA447573 | ENA

Sinorhizobium medicae strain:478

Project description:Sinorhizobium medicae 478 Resequencing

| PRJNA499429 | ENA

RNA Sequencing of livers from ApoE-/- mice treated with HIF1a inhibitor PX-478 or Saline

Project description:Purpose: HIF1a inhibitor PX-478 prevents hypercholesterolemia in ApoE-/- mice fed Western diet for 3 months. The goal of this study was to determine the mechanisms in the liver through which PX-478 regulates cholesterol. Methods: 4-week old ApoE-/- mice were fed a Western diet and injected intraperitoneally, bi-weekly with either PX-478 (40 mg/kg) or Saline for 3 months. The livers of 3 PX-478-treated mice and 4 Saline-treated mice were used for this RNA-seq study. Results: We identified 800+ differentially expressed genes in the PX-478-treated ApoE-/- mice livers relative to the saline-treated control livers. A subset of these genes were found to play important roles in cholesterol regulation and were further validated by qPCR analysis. Conclusions: Our study details potential hepatic cholesterol regulating mechanisms for HIF1a inhibitor PX-478. These results, coupled with our findings on the effect of PX-478 on two different mouse models of atherosclerosis, demonstrate that PX-478 is a potential anti-atherogenic and anti-hypercholesterolemic drug.

2022-02-18 | GSE179952 | GEO

Escherichia coli strain:3-178 | isolate:3-178

Project description:Escherichia coli strain:3-178 | isolate:3-178 Genome sequencing

| PRJNA993435 | ENA

RNA-Seq analysis of leaves of maize drought tolerant mutant line Chang7-2t under water deficit

Project description:Identification of gene expression changes responding to water deficit in leaves of maize drought tolerant mutant line Chang7-2t.

2022-02-28 | E-MTAB-11331 | biostudies-arrayexpress

Pseudomonas sp. 478

Project description:Pseudomonas sp. 478 Genome sequencing and assembly

| PRJNA463451 | ENA

Bradyrhizobium japonicum strain:USDA 178 | isolate:USDA 178

Project description:Bradyrhizobium japonicum USDA 178 genome sequencing

| PRJNA1115767 | ENA

Thiocystis minor strain:DSM 178 | isolate:DSM 178

Project description:Thiocystis minor DSM 178 genome sequencing

| PRJNA335146 | ENA