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THE DNA BINDING LANDSCAPE OF THE MAIZE AUXIN RESPONSE FACTOR FAMILY [DAP-seq]

ABSTRACT: THE DNA BINDING LANDSCAPE OF THE MAIZE AUXIN RESPONSE FACTOR FAMILY [DAP-seq]

PROVIDER: PRJNA438151 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR6830280.fastq.gz	Fastqsanger.gz
	SRR6830290.fastq.gz	Fastqsanger.gz
	SRR6830281.fastq.gz	Fastqsanger.gz
	SRR6830291.fastq.gz	Fastqsanger.gz
	SRR6830282.fastq.gz	Fastqsanger.gz

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THE DNA BINDING LANDSCAPE OF THE MAIZE AUXIN RESPONSE FACTOR FAMILY [DAP-seq]

Project description:DAP-seq was used to generate genome-wide DNA:TF interaction maps for fourteen maize ARFs from the evolutionarily conserved class A ‘activator’ and class B ‘repressor’ clades. Among the distinct binding sites that were identified, we observed a high degree of overlap for ARFs of the same class, but found substantial differences in motif sequence, spacing, site preference, and association with auxin induced genes among clade A and clade B ARFs.

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