Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Schizosaccharomyces octosporus strain:h90

ABSTRACT: Schizosaccharomyces octosporus strain:h90 Genome sequencing and assembly

PROVIDER: PRJNA453680 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Schizosaccharomyces octosporus

Project description:RNA sequencing and Nanopore cDNA sequencing of Schizosaccharomyces octosporus diploid cells undergoing azygotic meiosis

| PRJNA795833 | ENA

Schizosaccharomyces octosporus yFS286

Project description:Schizosaccharomyces octosporus yFS286 transcriptome project

| PRJNA51823 | ENA

Transcriptional profiling of a genome-reduced strain in Schizosaccharomyces pombe

Project description:Gene number of the fission yeast Schizosaccharomyces pombe is the lowest in free-living eukaryotes. We further reduced the gene number to examine a minimal gene set required for growth. The genome-reduced strain, named ASP3894, has four chromosomal deletion regions: 168.4 kb deletion in the left arm of chromosome 1 (ALT), 155.4 kb deletion in the right arm of chromosome 1 (ART), 211.7 kb deletion in the left arm of chromosome 2 (BLT) and 121.6 kb deletion in the right arm of chromosome 2 (BRT). As a result of the 657.3 kb genome reduction, 224 genes of approximately 5100 total genes were reduced. ASP3894 transcriptional profiling was compared with a parent strain, ASP3880, that is a non-genome-reduced strain to examine the influence of genome reduction.

2013-05-01 | GSE38620 | GEO

Schizosaccharomyces pombe strain:EBC7

Project description:Schizosaccharomyces pombe strain:EBC7 Genome sequencing and assembly

| PRJNA438043 | ENA

Schizosaccharomyces japonicus strain:Sj4

Project description:Schizosaccharomyces japonicus strain:Sj4 Genome sequencing and assembly

| PRJNA431027 | ENA

Schizosaccharomyces japonicus strain:h90

Project description:Schizosaccharomyces japonicus strain:h90 Genome sequencing and assembly

| PRJNA453683 | ENA

Schizosaccharomyces cryophilus strain:h90

Project description:Schizosaccharomyces cryophilus strain:h90 Genome sequencing and assembly

| PRJNA453679 | ENA

Schizosaccharomyces octosporus

Project description:Genome used in a comparative analysis to elucidate fission yeast evolution

| PRJNA13636 | ENA

Schizosaccharomyces pombe strain:tiTELs

Project description:Schizosaccharomyces pombe strain:tiTELs Genome sequencing

| PRJNA307606 | ENA

Heat-shock molecular chaperone Hsp90 is involved in heterochromatin assembly in Schizosaccharomyces pombe.

Project description:Here, we report the high-throughput profiling of histone modification (H3K9me2) in fission yeast Schizosaccharomyces pombe. We generated genome-wide H3K9me2 maps of fission yeast mutants in swo1-26 (temperature sensitive, ts) cells at 25℃ and 37℃. We find that H3K9me2 enrichment at heterochromatin regions, especially at the mating-type locus and subtelomeres, is compromised, suggesting heterochromatin assembly defects.

2020-06-18 | GSE140617 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data