Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Heavy ion beam-induced rice mutants and M2 populations

PROVIDER: PRJNA470772 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR7142120_1.fastq.gz	Fastqsanger.gz
	SRR7142120_2.fastq.gz	Fastqsanger.gz
	SRR7142130_1.fastq.gz	Fastqsanger.gz
	SRR7142130_2.fastq.gz	Fastqsanger.gz
	SRR7142140_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 348

Similar Datasets

Arabidopsis thaliana strain:col-0

Project description:Whole genome sequencing, Heavy-ion beam-induced mutants of Arabidopsis thaliana

| PRJDB3022 | ENA

Arabidopsis thaliana strain:col-0

Project description:Whole genome sequencing, Heavy-ion beam-induced mutants of Arabidopsis thaliana

| PRJDB5412 | ENA

Arabidopsis thaliana strain:Ar50-46-pl1

Project description:Whole genome sequencing, Heavy-ion beam-induced mutants of Arabidopsis thaliana

| PRJDB10478 | ENA

Arabidopsis thaliana strain:col-0

Project description:Whole genome sequencing, Heavy-ion beam-induced mutants of Arabidopsis thaliana

| PRJDB12964 | ENA

A phase I/II clinical study of Carbon Ion Radiotherapy using 1 fraction for Liver Metastasis from Colorectal Cancer

Project description:Interventions: Prescribed heavy-ion beam (carbon-ion beam) dose. Initial dose 36Gy(RBE). Dose escalated until dose limiting toxicity is met. Primary outcome(s): Acute toxicity and initial tumor response Study Design: expanded access Non-randomized

| 2648031 | ecrin-mdr-crc

Nitrogen-ion-beam implantation effect on rice dry seeds

Project description:Analysis of 96-hours-old-rice seedlings with promoted-growth induced by implantation with low-energy nitrogen ion beam. Ion-beam implantation can induce changes in 351 up-regulated transcripts and 470 down-regulated transcripts, including signaling proteins, kinases, plant hormones, transposable elements, transcription factors, non-coding protein RNAs, secondary metabolites, resistance proteins, peroxidase, chromatin modification and even miRNAs. Results provide insight into the molecular basis of biological effects of plants that implanted by ion beam. Three sample groups—the controls, the ion-beam implanted samples and vacuum-treated samples. Three replicates were included in each sample group. Radiation induced gene expression rice seedlings was measured at 96 hours after germination of the seeds.

2012-03-01 | E-GEOD-36152 | biostudies-arrayexpress

LET-dependent change in rice gene expression profile after heavy-ion beam irradiation [time]

Project description:Linear energy transfer (LET) is an important factor affecting several aspects of the irradiation effect, e.g. cell survival and mutation frequency, making the heavy-ion beam an effective mutagen. To study the mechanisms behind LET-dependent effects, expression profiling was performed after heavy-ion beam irradiation of imbibed rice seeds. Array-based experiments at three time points (0.5, 1, 2 h after the irradiation) revealed that the number of up- or down-regulated genes was highest 2 h after irradiation. Array-based experiments with four different LETs at 2 h after irradiation identified LET-independent regulated genes that were up/down-regulated regardless of the value of LET; LET-dependently regulated genes, whose expression level increased with the rise of LET value, were also identified.

2016-07-01 | GSE78997 | GEO

LET-dependent change in rice gene expression profile after heavy-ion beam irradiation [LET]

2016-07-01 | GSE78994 | GEO

Nitrogen-ion-beam implantation effect on rice dry seeds

2012-03-01 | GSE36152 | GEO

LET-dependent change in rice gene expression profile after heavy-ion beam irradiation [time]

2016-07-01 | E-GEOD-78997 | biostudies-arrayexpress