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Populus deltoides x Populus x canadensis

ABSTRACT: Populus deltoides x Populus x canadensis overview

PROVIDER: PRJNA476185 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
	SRR15044204_1.fastq.gz	Fastqsanger.gz
	SRR15044204_2.fastq.gz	Fastqsanger.gz
	SRR15044205_1.fastq.gz	Fastqsanger.gz
	SRR15044205_2.fastq.gz	Fastqsanger.gz
	SRR15044206_1.fastq.gz	Fastqsanger.gz

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2010-06-24 | E-GEOD-20117 | biostudies-arrayexpress

Gene expression in whole-roots of a Populus trichocarpa and Populus deltoides pseudo-backcross population

Project description:A microarray analysis of whole-genome gene expression in roots was carried out in a (Populus trichocarpa X Populus deltoides) X Populus deltoides pseudo-backcross pedigree. Genetic variation in gene expression was quantified for 55,793 predicted gene models based on a single probe per gene. Resultant data contributed to the analysis of the genetic architecture of gene expression in roots of Populus. Data include one biological replicate of 163 individuals segregating from a pseudo-backcross pedigree of (Populus trichocarpa X Populus deltoides) X Populus deltoides analyzed for gene expression (GE) in roots using one probe per gene for 55793 independent gene models (probes E_POPLARSxxxxxPxxxxx) and single feature sequence polymorphism (SFP) using one probe per gene for 12084 independent gene models (probes G_POPLARSxxxxxPxxxxx). GE and SFP probes were selected from 6-7 probes per gene previously tested in a pilot study of the two parent trees of the cross (Populus deltoides X Populus trichocarpa)

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Populus deltoides x Populus x canadensis

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Project description:Populus deltoides x Populus x canadensis Raw sequence reads

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