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Trichobilharzia szidati

ABSTRACT: Trichobilharzia szidati Transcriptome or Gene expression

PROVIDER: PRJNA485010 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR7687400_1.fastq.gz	Fastqsanger.gz
	SRR7687400_2.fastq.gz	Fastqsanger.gz
	SRR7687401_1.fastq.gz	Fastqsanger.gz
	SRR7687401_2.fastq.gz	Fastqsanger.gz
	SRR7687402_1.fastq.gz	Fastqsanger.gz

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Project description:Genomic assembly of trematode Trichobilharzia regenti, as part of the 50 Helminth Genomes Initiative sequencing of the parasitic worms that have the greatest impact on human, agricultural and veterinary disease and cause significant global health issues particularly in the developing world, or those used as model organisms.

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Trichobilharzia szidati Genome sequencing

Project description:Genomic assembly of trematode Trichobilharzia szidati, as part of the 50 Helminth Genomes Initiative sequencing of the parasitic worms that have the greatest impact on human, agricultural and veterinary disease and cause significant global health issues particularly in the developing world, or those used as model organisms.

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Biomarks of Resistance to Cetuximab in Colorectal Cancer

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Project description:BackgroundCercarial dermatitis is known as an endemic parasitic disease in North of Iran, a hypersensitive skin reaction to the penetration of nonhuman schistosome larvae into human skin. In recent studies in this region, final and intermediate hosts were recognized and Trichobilharzia was identified as the main causative agent of cercarial dermatitis in this region, but to date the parasite species haven't been identified. Therefore this study was performed to species identification of nasal Trichobilharzia in infected birds for the first time.MethodsA total of 45 Anas clypeata birds identified as final host, were collected from Sari in North of Iran and infected nasal tissues analyzed using molecular techniques. Genomic DNA was isolated by phenol/chloroform extraction method and ITS region of rDNA were amplified with specific primers its5Trem and its4Trem, then sequenced area were compared with existing records in GenBank.ResultsTwelve samples were infected with Trichobilharzia and results of PCR reaction indicated that all of them belonged to T. regenti. The sequence alignment of present work isolates and those deposited in GenBank showed differences in nucleotide sequences of repeat region in ITS1.ConclusionTrichobilharzia regenti is the most frequent parasite of Anatid birds in North of Iran. This corresponds to the distribution of this parasite along the flyway of migratory birds, which annually migrate from Siberia and northern countries of Caspian Sea to wintering areas in southern regions of it.

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TR study of ‘multicenter Phase II study to evaluate efficacy and safety of combination therapy with trastuzumab and pertuzumab in patients with HER2-positive metastatic colorectal cancer&quot

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TR study of ‘A multicenter phase II study of eribulin monotherapy in patients with BRAF V600E mutant metastatic colorectal cancer (BRAVERY study)&quot

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Transcriptome and proteome derived networks reveal distinct and complementary gene relationships - additional phosphoproteomics data

Project description:Co-expression networks and gene regulatory networks (GRNs) are emerging as important tools for predicting the functional roles of individual genes at a system-wide scale. To enable network reconstructions we built a large-scale gene expression atlas comprised of 62,547 mRNAs, 17,862 non-modified proteins, and 6,227 phosphoproteins harboring 31,595 phosphorylation sites quantified across maize development. There was little edge conservation in co-expression and GRNs reconstructed using transcriptome versus proteome data yet networks from either data type were enriched in ontological categories and effective in predicting known regulatory relationships. This integrated gene expression atlas provides a valuable community resource. The networks should facilitate plant biology research and they provide a conceptual framework for future systems biology studies highlighting the importance of studying gene regulation at several levels.

| MSV000079303 | MassIVE

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