Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Genomic characterization of a core set of the USDA-NPGS Ethiopian sorghum germplasm collection

PROVIDER: PRJNA488736 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR7773580.fastq.gz	Fastqsanger.gz
	SRR7773590.fastq.gz	Fastqsanger.gz
	SRR7773600.fastq.gz	Fastqsanger.gz
	SRR7773610.fastq.gz	Fastqsanger.gz
	SRR7773620.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 370

Similar Datasets

Project description:Genomic characterization of USDA-NPGS Sudanese sorghum core collection

| PRJNA565973 | ENA

Lactuca sativa L.

Project description:Development of the core lettuce germplasm collection

| PRJNA1250783 | ENA

Echinochloa

Project description:Genotyping of global barnyard millet germplasm core collection

| PRJNA264049 | ENA

small RNAs sequencing in sweet sorghum under cadmium stress

Project description:Four small RNA libraries from two contrasting sweet sorghum genotypes were sequenced. In this study, One hundred and ninety-five conserved miRNAs belonging to 56 families and 25 putative novel miRNAs from 28 precursors were identified, among which 38 conserved and 24 novel miRNAs were differentially expressed under Cd stress and/or between H18 and L69. Two groups of them: miR169p/q-nov_23 and miR408 were further focused through the coexpression analysis and might be involved in Cd transport, cytoskeleton activity and cell wall construction by regulating their targets. This study presents new insights into the regulatory roles of miRNAs in Cd accumulation and tolerance in sweet sorghum and will help to develop high-Cd accumulation or high Cd-resistant germplasm of sweet sorghum through molecular breeding and/or genetic engineering approaches.

2023-10-12 | GSE145617 | GEO

Project description:Genomic characterization of USDA-NPGS Sweet sorghum diversity panel.

| PRJNA1076005 | ENA

Project description:Characterization of carotenoids in sorghum germplasm

| PRJEB60406 | ENA

Oryza sativa

Project description:USDA Rice Germplasm resequencing

| PRJNA603026 | ENA

Project description:Whole genome re-sequencing of rice USDA mini-core collection

| PRJNA792623 | ENA

Project description:Sorghum mini-core (sub-) set resequencing

| PRJNA598805 | ENA