Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Burkholderia cenocepacia isolate:bc-1386 | cultivar:Leila Vali

ABSTRACT: Burkholderia cenocepacia isolate:bc-1386 | cultivar:Leila Vali Genome sequencing and assembly

PROVIDER: PRJNA491387 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Identification of potential therapeutic targets for Burkholderia cenocepacia by comparative transcriptomics

Project description:[1] Transcription profiling of one Burkholderia cenocepacia clinical isolate, J2315, versus a soil isolate, HI2424, in conditions mimicking CF sputum [2] Transcription profiling of Burkholderia cenocepacia isolates J2315 and HI2424 in media mimicking CF sputum or the soil environment

2009-12-01 | GSE15817 | GEO

Comparative genomic hybridization of a Burkholderia cenocepacia collection

Project description:Individual normalized intensity of Burkholderia cenocepacia and Burkholderia seminalis hybridized in a B. cenocepacia array

2014-07-31 | GSE58353 | GEO

Burkholderia cenocepacia strain:BC-19

Project description:Burkholderia cenocepacia strain:BC-19 Genome sequencing and assembly

| PRJNA275519 | ENA

Burkholderia cenocepacia strain:BC-21

Project description:Burkholderia cenocepacia strain:BC-21 Genome sequencing and assembly

| PRJNA275520 | ENA

Burkholderia cenocepacia strain:BC-40

Project description:Burkholderia cenocepacia strain:BC-40 Genome sequencing and assembly

| PRJNA275521 | ENA

Burkholderia cenocepacia strain:BC-41

Project description:Burkholderia cenocepacia strain:BC-41 Genome sequencing and assembly

| PRJNA275522 | ENA

Identification of potential therapeutic targets for Burkholderia cenocepacia by comparative transcriptomics

2010-05-19 | E-GEOD-15817 | biostudies-arrayexpress

Expression data from Burkholderia cenocepacia J2315 hfq and hfq2 mutants

Project description:Hfq proteins are RNA chaperones that play a critical role in post-transcription regulation of gene expression. Bacteria of the Burkholderia cepacia complex harbor two distinct and functional Hfq proteins, the Hfq and Hfq2. We have previously performed the functional analysis of Hfq and Hfq2 in the pathogen Burkholderia cenocepacia J2315. In order to examine the impacts of each RNA chaperone on the global transcriptome of B. cenocepacia J2315, we performed comparative transcriptome profile of mutants on the hfq and hfq2 genes, using as reference the wild-type strain.

2014-01-01 | GSE47344 | GEO

Burkholderia cenocepacia strain:BC-3

Project description:Burkholderia cenocepacia Genome sequencing

| PRJNA275518 | ENA

s54 -dependent response to nitrogen limitation and virulence in Burkholderia cenocepacia H111

Project description:Members of the genus Burkholderia are versatile bacteria capable of colonizing highly diverse environmental niches. In this study, we investigated the global response of the opportunistic pathogen Burkholderia cenocepacia H111 to nitrogen limitation at the transcript and protein expression level. In addition to a classical response to nitrogen starvation, including the activation of glutamine synthetase, PII proteins and the two component regulatory system ntrBC, B. cenocepacia H111 also up-regulated polyhydroxybutyrate (PHB) accumulation and exopolysaccharide (EPS) production in response to nitrogen shortage. A search for consensus sequences in promoter regions of nitrogen responsive genes identified a s54 consensus sequence. The mapping of the s54 regulon as well as the characterization of a s54 mutant suggests an important role of s54 not only in control of nitrogen metabolism, but also in virulence of this organism.

2015-04-29 | GSE66328 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data