Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Adineta vaga strain:MBL

ABSTRACT: Expression of DNA damage repair genes

PROVIDER: PRJNA494578 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR7962070_1.fastq.gz	Fastqsanger.gz
	SRR7962070_2.fastq.gz	Fastqsanger.gz
	SRR7962071_1.fastq.gz	Fastqsanger.gz
	SRR7962071_2.fastq.gz	Fastqsanger.gz
	SRR7962072_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 18

Similar Datasets

Adineta vaga isolate:MBL

Project description:Adineta vaga

| PRJNA313073 | ENA

Adineta vaga

Project description:Adineta vaga Transcriptome or Gene expression

| PRJNA195592 | ENA

Adineta vaga

Project description:Transcriptomic reads of Adineta vaga under radiation and desiccation treatments

| PRJNA962496 | ENA

Adineta vaga

Project description:Adineta vaga overview

| PRJNA195949 | ENA

Adineta vaga

Project description:Population genomics of the bdelloid rotifer Adineta vaga

| PRJNA498886 | ENA

Adineta vaga

Project description:Adineta vaga - Genome sequencing and assembly

| PRJNA945622 | ENA

Adineta vaga

Project description:Adineta vaga Genome sequencing

| PRJNA195603 | ENA

Anions mediate ligand binding in Adineta vaga glutamate receptor ion channels.

Project description:AvGluR1, a glutamate receptor ion channel from the primitive eukaryote Adineta vaga, is activated by alanine, cysteine, methionine, and phenylalanine, which produce lectin-sensitive desensitizing responses like those to glutamate, aspartate, and serine. AvGluR1 LBD crystal structures reveal an unusual scheme for binding dissimilar ligands that may be utilized by distantly related odorant/chemosensory receptors. Arginine residues in domain 2 coordinate the γ-carboxyl group of glutamate, whereas in the alanine, methionine, and serine complexes a chloride ion acts as a surrogate ligand, replacing the γ-carboxyl group. Removal of Cl(-) lowers affinity for these ligands but not for glutamate or aspartate nor for phenylalanine, which occludes the anion binding site and binds with low affinity. AvGluR1 LBD crystal structures and sedimentation analysis also provide insights into the evolutionary link between prokaryotic and eukaryotic iGluRs and reveal features unique to both classes, emphasizing the need for additional structure-based studies on iGluR-ligand interactions.

| S-EPMC4096996 | biostudies-literature

DNA repair during nonreductional meiosis in the asexual rotifer <i>Adineta vaga</i>.

Project description:Rotifers of the class Bdelloidea are microscopic animals notorious for their long-term persistence in the apparent absence of sexual reproduction and meiotic recombination. This evolutionary paradox is often counterbalanced by invoking their ability to repair environmentally induced genome breakage. By studying the dynamics of DNA damage response in the bdelloid species Adineta vaga, we found that it occurs rapidly in the soma, producing a partially reassembled genome. By contrast, germline DNA repair is delayed to a specific time window of oogenesis during which homologous chromosomes adopt a meiotic-like juxtaposed configuration, resulting in accurate reconstitution of the genome in the offspring. Our finding that a noncanonical meiosis is the mechanism of germline DNA repair in bdelloid rotifers gives previously unidentified insights on their enigmatic long-term evolution.

| S-EPMC9710870 | biostudies-literature

Adineta vaga strain:AD008

Project description:Adineta vaga chromosome-level genome sequencing and assembly

| PRJNA680543 | ENA