Project description:Transcriptome profiles of four cell types from the choanoflagellate Salpingoeca rosetta : Slow Swimmers, Rosettes, Fast Swimmers, and Thecate

2024-05-20 | GSE267344 | GEO

Salpingoeca rosetta strain:ATCC 50818

Project description:Salpingoeca rosetta ATCC50818 transcriptome project

| PRJNA62005 | ENA

Salpingoeca rosetta

Project description:Salpingoeca rosetta mutant and bulked segregant genome re-sequencing

| PRJNA490902 | ENA

Salpingoeca rosetta strain:ATCC PRA-366

Project description:Salpingoeca rosetta strain:ATCC PRA-366 Genome sequencing

| PRJNA222515 | ENA

Salpingoeca rosetta strain:SrEpac

Project description:Salpingoeca rosetta strain:SrEpac Genome sequencing and assembly

| PRJNA509682 | ENA

Cell-type transcriptomes for the choanoflagellate Salpingoeca rosetta

Project description:Cell-type transcriptomes for the choanoflagellate Salpingoeca rosetta

| PRJNA1111112 | ENA

Chromatin loops are an ancestral hallmark of the animal regulatory genome [Micro-C]

Project description:We characterised the genome organization in non-bilaterian animals (sponge Ephydatia muelleri, ctenophores Mnemiopsis leidyi and Hormiphora californensis, placozoans Trichoplax adhaerens and Cladtertia collaboinventa, and cnidarian Nematostella vectensis) and close unicellular relatives (ichthyosporeans Sphaeroforma arctica, filasterean Capsaspora owczarzaki and choanoflagellate Salpingoeca rosetta) by combining high-resolution chromosome conformation capture (Micro-C) with profiling of chromatin marks (ChIP-seq), accessible genomic regions (ATAC-seq) and gene expression (MARS-seq).

2025-03-11 | GSE260571 | GEO

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