Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Wingless and wing cotton aphid RNA-sequencing

PROVIDER: PRJNA510737 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR8352180.fastq.gz	Fastqsanger.gz
	SRR8352181.fastq.gz	Fastqsanger.gz
	SRR8352174.fastq.gz	Fastqsanger.gz
	SRR8352175.fastq.gz	Fastqsanger.gz
	SRR8352176.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 8

Similar Datasets

Project description:Wingless and three wing morphs in cotton aphid

| PRJNA544300 | ENA

Expression of small RNA in Aphis gossypii and its potential role in the resistance interaction with melon

Project description:This study was designed to identify the sRNAs in Aphis gossypii (cotton-melon aphid) during Vat-mediated resistance in teraction with melon

2013-06-01 | GSE38641 | GEO

Aphis gossypii

Project description:cotton aphid RNA-seq

| PRJNA301196 | ENA

Project description:RNA-seq of Winged and Wingless soybean aphid

| PRJNA1172591 | ENA

Proteomic analysis of saliva and salivary gland of Aphis gossypii

Project description:The cotton - melon aphid Aphis gossypii is an extremely polyphagous sap feeding insect which infests more than 900 crops worldwide and posing a severe threat to farmers. The salivary proteins acts as interface between aphid and their host plant.However, the cotton aphid salivary proteome was not studied yet. Identifying the salivary proteins helps in better understanding of aphid adaptation to their host plant which aids us to search for novel plant genetic source.

2024-09-09 | PXD045238 | JPOST Repository

The complex role of Naked cuticle in Drosophila wing development

Project description:It is of tremendous interests to understand how Wnt signaling is regulated in a precise manner both temporally and spatially. Naked cuticle (Nkd) acts as a negative-feedback inhibitor for Wingless (Wg, a fly Wnt) signaling in Drosophila embryonic development. In the present study, we show that nkd is essential for wing pattern formation, such that both gain and loss of nkd result in the disruption of Wg target expression in larvae stage and abnormal adult wing morphologies. Our results of high-throughput sequencing suggest that nkd have profound effects on Drosophila wing development with several critical signaling pathways involved, we conclude that Nkd inhibits the canonical Wg pathway during Drosophila wing development beyond embryonic stage and may play a mediated role in cross-talk between development-related pathways.

2024-01-31 | GSE167145 | GEO

Project description:Cotton aphid microbiome

| PRJNA1113681 | ENA

Project description:RNA-sequencing on gynopara and male of cotton aphid

| PRJNA544512 | ENA

Expression of small RNA in Aphis gossypii and its potential role in the resistance interaction with melon

Project description:This study was designed to identify the sRNAs in Aphis gossypii (cotton-melon aphid) during Vat-mediated resistance in teraction with melon Methods: Whole insects were collected from susceptible (Vat-) and resistant (Vat+) plants after 48 hours of feeding. Total RNA was extracted from the aphids and enriched for LMW RNA and small RNA libraries were constructed using standard protocols and deep sequenced using Illumina GAII analyzer.

2013-06-01 | E-GEOD-38641 | biostudies-arrayexpress

Transdetermination study

Project description:Drosophila imaginal disc cells can switch fates by transdetermining from one determined state to another. We analyzed the expression profiles of cells induced by ectopic Wingless expression to transdetermine from leg to wing by dissecting transdetermined cells and hybridizing probes generated by linear RNA amplification to DNA microarrays. Changes in expression levels implicated a number of genes: lamina ancestor, CG12534 (a gene orthologous to mouse augmenter of liver regeneration), Notch pathway members, and the Polycomb and trithorax groups of chromatin regulators. Functional tests revealed that transdetermination was significantly affected in mutants for lama and seven different PcG and trxG genes. These results validate our methods for expression profiling as a way to analyze developmental programs, and show that modifications to chromatin structure are key to changes in cell fate. Our findings are likely to be relevant to the mechanisms that lead to disease when homologs of Wingless are expressed at abnormal levels and to the manifestation of pluripotency of stem cells. Keywords: cell type comparison, response to genetic alteration (Wingless over-expression) or mechanical injury (regeneration)

2005-07-08 | GSE2886 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data