Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNA-sequencing in irradiated and normal A549 cells.

ABSTRACT: RNA-sequencing in irradiated and normal A549 cells.

PROVIDER: PRJNA511903 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR8371690_1.fastq.gz	Fastqsanger.gz
	SRR8371690_2.fastq.gz	Fastqsanger.gz
	SRR8371691_1.fastq.gz	Fastqsanger.gz
	SRR8371691_2.fastq.gz	Fastqsanger.gz
	SRR8371692_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 18

Similar Datasets

RNA-sequencing in irradiated and normal A549 cells.

Project description:The aim of this study is to investigate the role of circRNAs/miRNAs/lncRNAs in radioresistance in A549 cells. For irradiation, A549 cells were exposed to a single fraction 2 GY or 4GY X-ray dose using an X-RAD 160-225 instrument (Precision X-Ray, Inc., Branford, CT, USA; filter: 2 mm AI; 42 cm, 225 kV/s, 12.4 mA, 2.0 Gy/min). The irradiated A549 cells (after a single dose of irradiation) and normal A549 cells were cultured for further 48h and then collected its total RNA for high-throughput sequencing.

2018-12-27 | GSE124396 | GEO

RNA-seq analysis using A549 cells with TRIM22 knockdown and control A549 cells with or without ionizing radiation treatment.

Project description:In this study, we explored the role of TRIM22 in the response to ionizing radiation (IR) in A549 human lung cancer cells. TRIM22 was stably knocked down in A549 cells using shRNA, and four experimental groups were established: control A549 cells (non-irradiated), control A549 cells (irradiated), TRIM22 knockdown A549 cells (non-irradiated), and TRIM22 knockdown A549 cells (irradiated). RNA sequencing (RNA-seq) was performed to identify gene expression changes associated with TRIM22 knockdown and irradiation. This dataset provides insights into the molecular mechanisms by which TRIM22 influences the cellular response to radiation and its potential impact on cancer therapy.

2025-01-01 | GSE277805 | GEO

RNA-seq analysis using A549 cells with FXR knockdown and control A549 cells with or without ionizing radiation treatment.

Project description:In this study, we explored the role of FXR in the response to ionizing radiation (IR) in A549 human lung cancer cells. FXR was stably knocked down in A549 cells using shRNA, and four experimental groups were established: control A549 cells (non-irradiated), control A549 cells (irradiated), FXR knockdown A549 cells (non-irradiated), and FXR knockdown A549 cells (irradiated). RNA sequencing (RNA-seq) was performed to identify gene expression changes associated with FXR knockdown and irradiation. This dataset provides insights into the molecular mechanisms by which FXR influences the cellular response to radiation and its potential impact on cancer therapy.

2024-10-31 | GSE278872 | GEO

Epigenome analysis of irradiated and non-irradiated breast tumor tissue samples and normal controls

Project description:Genome wide DNA methylation profiling of irradiated and non-irradiated breast tumor samples and normal control tissue. The Illumina Infinium 27k Human DNA methylation Beadchip, Genome Build 36 was used to obtain DNA methylation profiles across approximately 27,000 CpGs in breast tumor samples. Samples included 20 non-irradiated tumor samples, 19 irradiated tumor samples and 9 normal controls.

2014-03-26 | GSE50220 | GEO

Expression data from mRNA in complex with EGFR from irradiated human A549 (ATCC CCL185) cells

Project description:Immunoprecipitation of EGFR from irradiated A549 (ATCC CCL185) cells was performed in order to characterize bound mRNA species with the help of microarray analysis As control experiment, immunoprecipitation was also performed with IgG

2017-12-21 | GSE92428 | GEO

mRNA state in normal and irradiated skin of rattus

Project description:We report the difference of mRNA and Long-non-coding RNA state between normal and irradiated skin of rattus

2016-12-31 | GSE86252 | GEO

Epigenome analysis of irradiated and non-irradiated breast tumor tissue samples and normal controls

2014-03-26 | E-GEOD-50220 | biostudies-arrayexpress

miRNA expression profiling of gamma-irradiated A549 cells at 4 h after irradiation

Project description:miRNA expression profiling of gamma-irradiated A549 cells at 4 h after irradiation

| PRJNA445848 | ENA

miRNA expression profiling of gamma-irradiated A549 cells at 24 h after irradiation.

Project description:miRNA expression profiling of gamma-irradiated A549 cells at 24 h after irradiation.

| PRJNA445849 | ENA