Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Siraitia grosvenorii Eukaryota Viridiplantae Streptophyta Embryophyta Tracheophyta Spermatophyta Magnoliophyta eudicotyledons Gunneridae Pentapetalae rosids fabids Cucurbitales Cucurbitaceae Siraitieae Siraitia.

ABSTRACT: The complete chloroplast genome of Siraitia grosvenorii

PROVIDER: PRJNA523890 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Eukaryota Viridiplantae Streptophyta Embryophyta Tracheophyta Spermatophyta Magnoliophyta eudicotyledons Gunneridae Pentapetalae Santalales Loranthaceae Psittacantheae Psittacanthinae.

Project description:Phylotranscriptomics of Caribbean Loranthaceous mistletoes

| PRJNA579197 | ENA

Carya cathayensis breed:Eukaryota Viridiplantae Streptophyta Embryophyta Tracheophyta Spermatophyta Magnoliophyta eudicotyledons Gunneridae Pentapetalae rosids fabids Fagales Juglandaceae Carya.

Project description:Carya cathayensis breed:Eukaryota Viridiplantae Streptophyta Embryophyta Tracheophyta Spermatophyta Magnoliophyta eudicotyledons Gunneridae Pentapetalae rosids fabids Fagales Juglandaceae Carya. Genome sequencing and assembly

| PRJNA515701 | ENA

The complete chloroplast genome sequence of the <i>Siraitia Grosvenorii</i> (Cucurbitaceae).

Project description:Siraitia grosvenorii is a famous Chinese plant used in traditional food and medicine with pharmacological effects. The complete chloroplast genome sequence of S. grosvenorii has been determined in this study. The total genome size is 158,834 bp in length and contains a pair of inverted repeats (IRs) of 26,288 bp, which were separated by large single-copy (LSC) and small single-copy (SSC) of 87,702 bp and 18,556 bp length, respectively. A total of 131 genes were predicted including 86 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Phylogenetic analysis showed that S. grosvenorii belongs to the family Cucurbitaceae. The complete chloroplast genome of S. grosvenorii would play a significant role in the development of molecular markers in plant phylogenetic and population genetic studies.

| S-EPMC7687387 | biostudies-literature

cellular organisms Eukaryota Viridiplantae Streptophyta Streptophytina Embryophyta Tracheophyta Euphyllophyta Spermatophyta Magnoliophyta Mesangiospermae eudicotyledons Gunneridae Pentapetalae asterids lamiids Lamiales Gesneriaceae Didymocarpoideae Trichosporeae Didymocarpinae Primulina

Project description:Primulina juliae_RAD-seq

| PRJNA416709 | ENA

Siraitia grosvenorii

Project description:Siraitia grosvenorii Raw sequence reads

| PRJNA339375 | ENA

Siraitia grosvenorii

Project description:Siraitia grosvenorii Transcriptome or Gene expression

| PRJNA1209606 | ENA

Siraitia grosvenorii

Project description:Siraitia grosvenorii Transcriptome or Gene expression

| PRJNA67121 | ENA

Siraitia grosvenorii

Project description:triploid and diploid Siraitia grosvenorii Transcriptome or Gene expression

| PRJNA231973 | ENA

Additional new minor cucurbitane glycosides from Siraitia grosvenorii.

Project description:Continuous phytochemical studies of the crude extract of Luo Han Guo (Siraitia grosvenorii) furnished three additional new cucurbitane triterpene glycosides, namely 11-deoxymogroside V, 11-deoxyisomogroside V, and 11-deoxymogroside VI. The structures of all the isolated compounds were characterized on the basis of extensive NMR and mass spectral data as well as hydrolysis studies. The complete ¹H- and ¹³C-NMR spectral assignments of the three unknown compounds are reported for the first time based on COSY, TOCSY, HSQC, and HMBC spectroscopic data.

| S-EPMC6271671 | biostudies-literature

Karyotype analysis and genetic variation of a mutant in Siraitia grosvenorii.

Project description:This study analyzed the differences in karyotype and genetic variation between a mutant and wild-type Siraitia grosvenorii. Genetic variation included changes in genome and gene expression by SRAP molecular markers. Results showed that wild-type S. grosvenorii was diploid, with a chromosome number of 2n = 2x = 28, whereas the mutant was tetraploid with a chromosome number of 2n = 4x = 56. 4573 DNA bands were obtained using 189 different primer combinations, 577 of which were polymorphic, averaging 3.1 bands for each primer pair, while 1998 pairs were identical. There were no apparent differences on bands amplified by most primer pairs. After comparing the diploid and tetraploid strains, the data generally indicated that the polymorphism would be quite low. 2917 cDNA bands were generated using 133 primer combinations, and stable and clearly differential fragments were sorted out, cloned and sequenced. Ninety-two differentially expressed fragments were successfully sequenced. Sequence analysis showed that most fragments had significant homologous nucleotide sequences with resistant to stress and photosynthesis genes, including ribulose-1,5-bisphosphate carboxylase/oxygenase, phosphoenolpyruvate carboxykinase, pyruvate kinase, peroxisomal membrane transporter, NBS-LRR type resistance protein, protein phosphatase and others. The results revealed that the tetraploid strain has more resistant and photosynthesis ability than its diploid relatives, which providing reference information and resources for molecular breeding and seedless Luohanguo.

| S-EPMC3249549 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data